Protein–RNA interactions for Protein: Q99JR8

Smarcd2, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2, mousemouse

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd2Q99JR8 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Smarcd2Q99JR8 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
Smarcd2Q99JR8 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Smarcd2Q99JR8 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Smarcd2Q99JR8 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Smarcd2Q99JR8 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Smarcd2Q99JR8 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Smarcd2Q99JR8 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Smarcd2Q99JR8 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Smarcd2Q99JR8 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC15.35■□□□□ 0.05
Smarcd2Q99JR8 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC15.35■□□□□ 0.05
Smarcd2Q99JR8 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Smarcd2Q99JR8 Gm27306-201ENSMUST00000183970 107 ntBASIC15.35■□□□□ 0.05
Smarcd2Q99JR8 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC15.35■□□□□ 0.05
Smarcd2Q99JR8 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Smarcd2Q99JR8 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Smarcd2Q99JR8 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Smarcd2Q99JR8 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC15.35■□□□□ 0.05
Smarcd2Q99JR8 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Smarcd2Q99JR8 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Smarcd2Q99JR8 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Smarcd2Q99JR8 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Smarcd2Q99JR8 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Smarcd2Q99JR8 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Smarcd2Q99JR8 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Smarcd2Q99JR8 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Smarcd2Q99JR8 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Smarcd2Q99JR8 Gm13233-201ENSMUST00000118760 1443 ntBASIC15.34■□□□□ 0.05
Smarcd2Q99JR8 Gm13244-201ENSMUST00000118855 1446 ntBASIC15.34■□□□□ 0.05
Smarcd2Q99JR8 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Smarcd2Q99JR8 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Smarcd2Q99JR8 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Smarcd2Q99JR8 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Smarcd2Q99JR8 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Smarcd2Q99JR8 Gm8096-201ENSMUST00000209921 1591 ntBASIC15.34■□□□□ 0.05
Smarcd2Q99JR8 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Smarcd2Q99JR8 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC15.34■□□□□ 0.05
Smarcd2Q99JR8 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Smarcd2Q99JR8 Gm8410-201ENSMUST00000117225 605 ntBASIC15.34■□□□□ 0.05
Smarcd2Q99JR8 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC15.34■□□□□ 0.05
Smarcd2Q99JR8 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Smarcd2Q99JR8 Gm17837-201ENSMUST00000186435 985 ntBASIC15.34■□□□□ 0.05
Smarcd2Q99JR8 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC15.34■□□□□ 0.05
Smarcd2Q99JR8 AC125206.2-201ENSMUST00000217454 574 ntBASIC15.34■□□□□ 0.05
Smarcd2Q99JR8 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Smarcd2Q99JR8 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Smarcd2Q99JR8 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Smarcd2Q99JR8 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
Smarcd2Q99JR8 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC15.34■□□□□ 0.05
Smarcd2Q99JR8 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC15.34■□□□□ 0.05
Smarcd2Q99JR8 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Smarcd2Q99JR8 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Smarcd2Q99JR8 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
Smarcd2Q99JR8 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Smarcd2Q99JR8 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Smarcd2Q99JR8 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Smarcd2Q99JR8 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Smarcd2Q99JR8 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Smarcd2Q99JR8 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC15.34■□□□□ 0.05
Smarcd2Q99JR8 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Smarcd2Q99JR8 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Smarcd2Q99JR8 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Smarcd2Q99JR8 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Smarcd2Q99JR8 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC15.33■□□□□ 0.05
Smarcd2Q99JR8 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Smarcd2Q99JR8 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Smarcd2Q99JR8 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Smarcd2Q99JR8 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Smarcd2Q99JR8 Gm12151-201ENSMUST00000121374 290 ntBASIC15.33■□□□□ 0.04
Smarcd2Q99JR8 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Smarcd2Q99JR8 Gm15593-201ENSMUST00000122085 1008 ntBASIC15.33■□□□□ 0.04
Smarcd2Q99JR8 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Smarcd2Q99JR8 Gm27437-201ENSMUST00000183429 107 ntBASIC15.33■□□□□ 0.04
Smarcd2Q99JR8 Gm8597-201ENSMUST00000191525 1109 ntBASIC15.33■□□□□ 0.04
Smarcd2Q99JR8 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC15.33■□□□□ 0.04
Smarcd2Q99JR8 Arhgef33-209ENSMUST00000225223 714 ntBASIC15.33■□□□□ 0.04
Smarcd2Q99JR8 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Smarcd2Q99JR8 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Smarcd2Q99JR8 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC15.33■□□□□ 0.04
Smarcd2Q99JR8 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Smarcd2Q99JR8 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Smarcd2Q99JR8 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC15.33■□□□□ 0.04
Smarcd2Q99JR8 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Smarcd2Q99JR8 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Smarcd2Q99JR8 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Smarcd2Q99JR8 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Smarcd2Q99JR8 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Smarcd2Q99JR8 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smarcd2Q99JR8 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smarcd2Q99JR8 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smarcd2Q99JR8 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smarcd2Q99JR8 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smarcd2Q99JR8 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smarcd2Q99JR8 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC15.32■□□□□ 0.04
Smarcd2Q99JR8 Gm13453-201ENSMUST00000118708 357 ntBASIC15.32■□□□□ 0.04
Smarcd2Q99JR8 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC15.32■□□□□ 0.04
Smarcd2Q99JR8 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC15.32■□□□□ 0.04
Smarcd2Q99JR8 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Smarcd2Q99JR8 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC15.32■□□□□ 0.04
Smarcd2Q99JR8 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC15.32■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms