Protein–RNA interactions for Protein: Q99J62

Rfc4, Replication factor C subunit 4, mousemouse

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc4Q99J62 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rfc4Q99J62 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC17.53■□□□□ 0.4
Rfc4Q99J62 Gm23547-201ENSMUST00000158210 271 ntBASIC17.53■□□□□ 0.4
Rfc4Q99J62 Gm18737-201ENSMUST00000173594 937 ntBASIC17.53■□□□□ 0.4
Rfc4Q99J62 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC17.53■□□□□ 0.4
Rfc4Q99J62 AC125206.2-201ENSMUST00000217454 574 ntBASIC17.53■□□□□ 0.4
Rfc4Q99J62 AC166341.4-201ENSMUST00000220625 123 ntBASIC17.53■□□□□ 0.4
Rfc4Q99J62 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Rfc4Q99J62 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
Rfc4Q99J62 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rfc4Q99J62 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Rfc4Q99J62 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC17.53■□□□□ 0.4
Rfc4Q99J62 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rfc4Q99J62 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC17.53■□□□□ 0.4
Rfc4Q99J62 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rfc4Q99J62 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rfc4Q99J62 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rfc4Q99J62 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rfc4Q99J62 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rfc4Q99J62 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC17.52■□□□□ 0.4
Rfc4Q99J62 Gm11543-201ENSMUST00000120758 370 ntBASIC17.52■□□□□ 0.4
Rfc4Q99J62 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC17.52■□□□□ 0.4
Rfc4Q99J62 Gm27437-201ENSMUST00000183429 107 ntBASIC17.52■□□□□ 0.4
Rfc4Q99J62 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rfc4Q99J62 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC17.52■□□□□ 0.4
Rfc4Q99J62 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rfc4Q99J62 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rfc4Q99J62 Gm38327-201ENSMUST00000195852 1755 ntBASIC17.52■□□□□ 0.4
Rfc4Q99J62 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Rfc4Q99J62 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rfc4Q99J62 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
Rfc4Q99J62 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Rfc4Q99J62 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Rfc4Q99J62 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
Rfc4Q99J62 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rfc4Q99J62 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rfc4Q99J62 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Rfc4Q99J62 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rfc4Q99J62 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rfc4Q99J62 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rfc4Q99J62 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rfc4Q99J62 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Rfc4Q99J62 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rfc4Q99J62 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Rfc4Q99J62 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rfc4Q99J62 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rfc4Q99J62 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC17.51■□□□□ 0.39
Rfc4Q99J62 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Rfc4Q99J62 Gm15693-201ENSMUST00000120470 637 ntBASIC17.51■□□□□ 0.39
Rfc4Q99J62 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
Rfc4Q99J62 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rfc4Q99J62 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC17.51■□□□□ 0.39
Rfc4Q99J62 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rfc4Q99J62 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rfc4Q99J62 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rfc4Q99J62 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Rfc4Q99J62 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rfc4Q99J62 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rfc4Q99J62 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rfc4Q99J62 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rfc4Q99J62 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rfc4Q99J62 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rfc4Q99J62 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC17.5■□□□□ 0.39
Rfc4Q99J62 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Rfc4Q99J62 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rfc4Q99J62 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rfc4Q99J62 AC153526.5-201ENSMUST00000218661 2147 ntBASIC17.5■□□□□ 0.39
Rfc4Q99J62 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rfc4Q99J62 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Rfc4Q99J62 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rfc4Q99J62 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC17.5■□□□□ 0.39
Rfc4Q99J62 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rfc4Q99J62 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Rfc4Q99J62 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Rfc4Q99J62 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC17.5■□□□□ 0.39
Rfc4Q99J62 Gm37277-201ENSMUST00000194052 1111 ntBASIC17.5■□□□□ 0.39
Rfc4Q99J62 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC17.5■□□□□ 0.39
Rfc4Q99J62 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rfc4Q99J62 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Rfc4Q99J62 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC17.5■□□□□ 0.39
Rfc4Q99J62 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rfc4Q99J62 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rfc4Q99J62 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rfc4Q99J62 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rfc4Q99J62 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC17.5■□□□□ 0.39
Rfc4Q99J62 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rfc4Q99J62 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Rfc4Q99J62 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rfc4Q99J62 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Rfc4Q99J62 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC17.5■□□□□ 0.39
Rfc4Q99J62 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rfc4Q99J62 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rfc4Q99J62 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rfc4Q99J62 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rfc4Q99J62 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rfc4Q99J62 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rfc4Q99J62 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rfc4Q99J62 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rfc4Q99J62 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Rfc4Q99J62 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC17.49■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms