Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdha3Q91Y16 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdha3Q91Y16 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdha3Q91Y16 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdha3Q91Y16 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdha3Q91Y16 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
Pcdha3Q91Y16 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdha3Q91Y16 Gm13036-201ENSMUST00000117799 748 ntBASIC15.93■□□□□ 0.14
Pcdha3Q91Y16 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdha3Q91Y16 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC15.93■□□□□ 0.14
Pcdha3Q91Y16 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdha3Q91Y16 Gm43514-201ENSMUST00000198852 424 ntBASIC15.93■□□□□ 0.14
Pcdha3Q91Y16 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC15.93■□□□□ 0.14
Pcdha3Q91Y16 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdha3Q91Y16 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdha3Q91Y16 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdha3Q91Y16 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdha3Q91Y16 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdha3Q91Y16 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC15.93■□□□□ 0.14
Pcdha3Q91Y16 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdha3Q91Y16 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdha3Q91Y16 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC15.93■□□□□ 0.14
Pcdha3Q91Y16 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdha3Q91Y16 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdha3Q91Y16 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdha3Q91Y16 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdha3Q91Y16 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdha3Q91Y16 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdha3Q91Y16 AC174678.1-201ENSMUST00000228007 2749 ntBASIC15.92■□□□□ 0.14
Pcdha3Q91Y16 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdha3Q91Y16 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdha3Q91Y16 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdha3Q91Y16 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdha3Q91Y16 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdha3Q91Y16 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC15.92■□□□□ 0.14
Pcdha3Q91Y16 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC15.92■□□□□ 0.14
Pcdha3Q91Y16 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdha3Q91Y16 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Pcdha3Q91Y16 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC15.92■□□□□ 0.14
Pcdha3Q91Y16 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdha3Q91Y16 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Pcdha3Q91Y16 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdha3Q91Y16 Gm15590-201ENSMUST00000078419 552 ntBASIC15.92■□□□□ 0.14
Pcdha3Q91Y16 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdha3Q91Y16 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Pcdha3Q91Y16 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Pcdha3Q91Y16 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Pcdha3Q91Y16 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdha3Q91Y16 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdha3Q91Y16 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdha3Q91Y16 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdha3Q91Y16 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdha3Q91Y16 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Pcdha3Q91Y16 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdha3Q91Y16 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdha3Q91Y16 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdha3Q91Y16 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Pcdha3Q91Y16 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdha3Q91Y16 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdha3Q91Y16 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdha3Q91Y16 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdha3Q91Y16 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Pcdha3Q91Y16 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC15.91■□□□□ 0.14
Pcdha3Q91Y16 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdha3Q91Y16 Gm1401-201ENSMUST00000122048 772 ntBASIC15.91■□□□□ 0.14
Pcdha3Q91Y16 Gm18489-201ENSMUST00000172565 551 ntBASIC15.91■□□□□ 0.14
Pcdha3Q91Y16 Gm18206-201ENSMUST00000207027 926 ntBASIC15.91■□□□□ 0.14
Pcdha3Q91Y16 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Pcdha3Q91Y16 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdha3Q91Y16 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdha3Q91Y16 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdha3Q91Y16 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Pcdha3Q91Y16 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdha3Q91Y16 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdha3Q91Y16 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC15.91■□□□□ 0.14
Pcdha3Q91Y16 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdha3Q91Y16 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdha3Q91Y16 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdha3Q91Y16 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdha3Q91Y16 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdha3Q91Y16 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdha3Q91Y16 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdha3Q91Y16 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdha3Q91Y16 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdha3Q91Y16 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdha3Q91Y16 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdha3Q91Y16 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdha3Q91Y16 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdha3Q91Y16 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdha3Q91Y16 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC15.9■□□□□ 0.14
Pcdha3Q91Y16 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdha3Q91Y16 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdha3Q91Y16 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Pcdha3Q91Y16 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC15.9■□□□□ 0.14
Pcdha3Q91Y16 Gm11185-201ENSMUST00000117732 1007 ntBASIC15.9■□□□□ 0.14
Pcdha3Q91Y16 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC15.9■□□□□ 0.14
Pcdha3Q91Y16 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC15.9■□□□□ 0.14
Pcdha3Q91Y16 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdha3Q91Y16 Gm7286-201ENSMUST00000182691 1007 ntBASIC15.9■□□□□ 0.14
Pcdha3Q91Y16 Gm7787-201ENSMUST00000216858 688 ntBASIC15.9■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms