Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhb20Q91XZ9 Cnbd1-201ENSMUST00000137780 1331 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Pcdhb20Q91XZ9 Gm13337-201ENSMUST00000119183 1594 ntBASIC14.85□□□□□ -0.03
Pcdhb20Q91XZ9 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhb20Q91XZ9 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhb20Q91XZ9 Gm45175-201ENSMUST00000208295 1375 ntTSL 5 BASIC14.85□□□□□ -0.03
Pcdhb20Q91XZ9 Gm13615-201ENSMUST00000120242 1612 ntBASIC14.84□□□□□ -0.03
Pcdhb20Q91XZ9 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhb20Q91XZ9 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhb20Q91XZ9 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhb20Q91XZ9 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC14.84□□□□□ -0.03
Pcdhb20Q91XZ9 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhb20Q91XZ9 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC14.84□□□□□ -0.03
Pcdhb20Q91XZ9 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhb20Q91XZ9 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhb20Q91XZ9 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhb20Q91XZ9 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhb20Q91XZ9 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC14.84□□□□□ -0.03
Pcdhb20Q91XZ9 Gm6938-201ENSMUST00000123014 771 ntTSL 3 BASIC14.84□□□□□ -0.03
Pcdhb20Q91XZ9 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhb20Q91XZ9 Tcrg-C4-201ENSMUST00000179181 985 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Pcdhb20Q91XZ9 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC14.84□□□□□ -0.03
Pcdhb20Q91XZ9 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC14.84□□□□□ -0.03
Pcdhb20Q91XZ9 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC14.84□□□□□ -0.03
Pcdhb20Q91XZ9 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC14.84□□□□□ -0.03
Pcdhb20Q91XZ9 Gm37228-201ENSMUST00000193574 331 ntTSL 5 BASIC14.84□□□□□ -0.03
Pcdhb20Q91XZ9 Gatad1-204ENSMUST00000196304 704 ntTSL 3 BASIC14.84□□□□□ -0.03
Pcdhb20Q91XZ9 Gm45167-201ENSMUST00000208007 322 ntBASIC14.84□□□□□ -0.03
Pcdhb20Q91XZ9 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC14.84□□□□□ -0.03
Pcdhb20Q91XZ9 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhb20Q91XZ9 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhb20Q91XZ9 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhb20Q91XZ9 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhb20Q91XZ9 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhb20Q91XZ9 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhb20Q91XZ9 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhb20Q91XZ9 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
Pcdhb20Q91XZ9 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhb20Q91XZ9 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhb20Q91XZ9 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhb20Q91XZ9 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhb20Q91XZ9 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhb20Q91XZ9 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhb20Q91XZ9 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhb20Q91XZ9 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhb20Q91XZ9 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhb20Q91XZ9 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhb20Q91XZ9 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Pcdhb20Q91XZ9 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhb20Q91XZ9 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Pcdhb20Q91XZ9 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC14.83□□□□□ -0.04
Pcdhb20Q91XZ9 Ptprs-211ENSMUST00000223859 5588 ntBASIC14.83□□□□□ -0.04
Pcdhb20Q91XZ9 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdhb20Q91XZ9 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdhb20Q91XZ9 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC14.83□□□□□ -0.04
Pcdhb20Q91XZ9 Gm15940-201ENSMUST00000156011 817 ntTSL 3 BASIC14.83□□□□□ -0.04
Pcdhb20Q91XZ9 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Pcdhb20Q91XZ9 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdhb20Q91XZ9 Gm27525-201ENSMUST00000184465 107 ntBASIC14.83□□□□□ -0.04
Pcdhb20Q91XZ9 A830092H15Rik-202ENSMUST00000195446 649 ntTSL 3 BASIC14.83□□□□□ -0.04
Pcdhb20Q91XZ9 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC14.83□□□□□ -0.04
Pcdhb20Q91XZ9 Gm45151-201ENSMUST00000205445 712 ntTSL 2 BASIC14.83□□□□□ -0.04
Pcdhb20Q91XZ9 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC14.83□□□□□ -0.04
Pcdhb20Q91XZ9 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdhb20Q91XZ9 Gm5799-201ENSMUST00000169023 1314 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Pcdhb20Q91XZ9 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.04
Pcdhb20Q91XZ9 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdhb20Q91XZ9 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Pcdhb20Q91XZ9 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdhb20Q91XZ9 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdhb20Q91XZ9 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhb20Q91XZ9 Gm39214-201ENSMUST00000210912 1542 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhb20Q91XZ9 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhb20Q91XZ9 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhb20Q91XZ9 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhb20Q91XZ9 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhb20Q91XZ9 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhb20Q91XZ9 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhb20Q91XZ9 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhb20Q91XZ9 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhb20Q91XZ9 Gm45276-201ENSMUST00000209549 1086 ntBASIC14.82□□□□□ -0.04
Pcdhb20Q91XZ9 AC160060.2-201ENSMUST00000220151 811 ntTSL 5 BASIC14.82□□□□□ -0.04
Pcdhb20Q91XZ9 AC131709.1-201ENSMUST00000224731 1180 ntBASIC14.82□□□□□ -0.04
Pcdhb20Q91XZ9 AC159093.1-201ENSMUST00000227779 380 ntBASIC14.82□□□□□ -0.04
Pcdhb20Q91XZ9 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhb20Q91XZ9 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhb20Q91XZ9 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhb20Q91XZ9 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC14.82□□□□□ -0.04
Pcdhb20Q91XZ9 Gm11873-201ENSMUST00000117877 1304 ntBASIC14.82□□□□□ -0.04
Pcdhb20Q91XZ9 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhb20Q91XZ9 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhb20Q91XZ9 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhb20Q91XZ9 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhb20Q91XZ9 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Pcdhb20Q91XZ9 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhb20Q91XZ9 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhb20Q91XZ9 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
Pcdhb20Q91XZ9 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC14.81□□□□□ -0.04
Pcdhb20Q91XZ9 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhb20Q91XZ9 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms