Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdhga4Q91XY4 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdhga4Q91XY4 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdhga4Q91XY4 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC15.03■□□□□ -0
Pcdhga4Q91XY4 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC15.03■□□□□ -0
Pcdhga4Q91XY4 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC15.03■□□□□ -0
Pcdhga4Q91XY4 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC15.03■□□□□ -0
Pcdhga4Q91XY4 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdhga4Q91XY4 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Pcdhga4Q91XY4 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC15.03■□□□□ -0
Pcdhga4Q91XY4 Gm11764-201ENSMUST00000120221 623 ntBASIC15.03■□□□□ -0
Pcdhga4Q91XY4 AC127302.2-201ENSMUST00000215212 268 ntBASIC15.03■□□□□ -0
Pcdhga4Q91XY4 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdhga4Q91XY4 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC15.03■□□□□ -0
Pcdhga4Q91XY4 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdhga4Q91XY4 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC15.03■□□□□ -0
Pcdhga4Q91XY4 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC15.03■□□□□ -0
Pcdhga4Q91XY4 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
Pcdhga4Q91XY4 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
Pcdhga4Q91XY4 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Pcdhga4Q91XY4 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdhga4Q91XY4 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdhga4Q91XY4 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC15.03■□□□□ -0
Pcdhga4Q91XY4 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdhga4Q91XY4 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Pcdhga4Q91XY4 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Pcdhga4Q91XY4 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Pcdhga4Q91XY4 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Pcdhga4Q91XY4 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Pcdhga4Q91XY4 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Pcdhga4Q91XY4 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC15.02■□□□□ -0
Pcdhga4Q91XY4 Gm12350-201ENSMUST00000121208 462 ntBASIC15.02■□□□□ -0
Pcdhga4Q91XY4 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC15.02■□□□□ -0
Pcdhga4Q91XY4 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC15.02■□□□□ -0
Pcdhga4Q91XY4 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC15.02■□□□□ -0
Pcdhga4Q91XY4 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC15.02■□□□□ -0
Pcdhga4Q91XY4 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC15.02■□□□□ -0
Pcdhga4Q91XY4 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Pcdhga4Q91XY4 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Pcdhga4Q91XY4 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Pcdhga4Q91XY4 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Pcdhga4Q91XY4 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Pcdhga4Q91XY4 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Pcdhga4Q91XY4 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Pcdhga4Q91XY4 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC15.02□□□□□ -0.01
Pcdhga4Q91XY4 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Pcdhga4Q91XY4 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhga4Q91XY4 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
Pcdhga4Q91XY4 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC15.01□□□□□ -0.01
Pcdhga4Q91XY4 Gm43352-201ENSMUST00000196419 3065 ntBASIC15.01□□□□□ -0.01
Pcdhga4Q91XY4 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhga4Q91XY4 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhga4Q91XY4 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhga4Q91XY4 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhga4Q91XY4 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhga4Q91XY4 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhga4Q91XY4 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhga4Q91XY4 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Pcdhga4Q91XY4 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhga4Q91XY4 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhga4Q91XY4 Gm15358-201ENSMUST00000119249 520 ntBASIC15.01□□□□□ -0.01
Pcdhga4Q91XY4 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC15.01□□□□□ -0.01
Pcdhga4Q91XY4 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhga4Q91XY4 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC15.01□□□□□ -0.01
Pcdhga4Q91XY4 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Pcdhga4Q91XY4 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhga4Q91XY4 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhga4Q91XY4 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhga4Q91XY4 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhga4Q91XY4 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Pcdhga4Q91XY4 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Pcdhga4Q91XY4 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
Pcdhga4Q91XY4 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhga4Q91XY4 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhga4Q91XY4 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC15.01□□□□□ -0.01
Pcdhga4Q91XY4 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhga4Q91XY4 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhga4Q91XY4 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdhga4Q91XY4 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC15□□□□□ -0.01
Pcdhga4Q91XY4 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdhga4Q91XY4 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdhga4Q91XY4 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdhga4Q91XY4 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdhga4Q91XY4 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
Pcdhga4Q91XY4 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC15□□□□□ -0.01
Pcdhga4Q91XY4 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdhga4Q91XY4 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdhga4Q91XY4 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdhga4Q91XY4 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC15□□□□□ -0.01
Pcdhga4Q91XY4 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdhga4Q91XY4 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC15□□□□□ -0.01
Pcdhga4Q91XY4 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdhga4Q91XY4 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC15□□□□□ -0.01
Pcdhga4Q91XY4 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC15□□□□□ -0.01
Pcdhga4Q91XY4 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC15□□□□□ -0.01
Pcdhga4Q91XY4 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdhga4Q91XY4 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdhga4Q91XY4 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdhga4Q91XY4 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdhga4Q91XY4 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms