Protein–RNA interactions for Protein: Q91XY2

Pcdhga6, Protocadherin gamma A6, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga6Q91XY2 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhga6Q91XY2 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhga6Q91XY2 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhga6Q91XY2 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhga6Q91XY2 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhga6Q91XY2 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhga6Q91XY2 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhga6Q91XY2 AC093043.3-201ENSMUST00000226531 2273 ntBASIC15.18■□□□□ 0.02
Pcdhga6Q91XY2 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhga6Q91XY2 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhga6Q91XY2 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhga6Q91XY2 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC15.18■□□□□ 0.02
Pcdhga6Q91XY2 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhga6Q91XY2 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhga6Q91XY2 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhga6Q91XY2 Gm22175-201ENSMUST00000175007 78 ntBASIC15.18■□□□□ 0.02
Pcdhga6Q91XY2 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC15.18■□□□□ 0.02
Pcdhga6Q91XY2 Gm19430-201ENSMUST00000193847 2137 ntBASIC15.18■□□□□ 0.02
Pcdhga6Q91XY2 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhga6Q91XY2 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhga6Q91XY2 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhga6Q91XY2 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhga6Q91XY2 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhga6Q91XY2 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC15.18■□□□□ 0.02
Pcdhga6Q91XY2 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhga6Q91XY2 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhga6Q91XY2 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhga6Q91XY2 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhga6Q91XY2 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhga6Q91XY2 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhga6Q91XY2 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhga6Q91XY2 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhga6Q91XY2 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhga6Q91XY2 Gm36858-201ENSMUST00000194501 2391 ntBASIC15.18■□□□□ 0.02
Pcdhga6Q91XY2 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC15.18■□□□□ 0.02
Pcdhga6Q91XY2 Gm5366-201ENSMUST00000215494 1338 ntBASIC15.17■□□□□ 0.02
Pcdhga6Q91XY2 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC15.17■□□□□ 0.02
Pcdhga6Q91XY2 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhga6Q91XY2 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhga6Q91XY2 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhga6Q91XY2 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhga6Q91XY2 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC15.17■□□□□ 0.02
Pcdhga6Q91XY2 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhga6Q91XY2 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhga6Q91XY2 Gm11424-201ENSMUST00000121929 829 ntBASIC15.17■□□□□ 0.02
Pcdhga6Q91XY2 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC15.17■□□□□ 0.02
Pcdhga6Q91XY2 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC15.17■□□□□ 0.02
Pcdhga6Q91XY2 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
Pcdhga6Q91XY2 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Pcdhga6Q91XY2 Gm27430-201ENSMUST00000184585 107 ntBASIC15.17■□□□□ 0.02
Pcdhga6Q91XY2 Gm43474-201ENSMUST00000196415 774 ntBASIC15.17■□□□□ 0.02
Pcdhga6Q91XY2 Gm44333-201ENSMUST00000197168 107 ntBASIC15.17■□□□□ 0.02
Pcdhga6Q91XY2 AC093926.2-201ENSMUST00000214468 1228 ntBASIC15.17■□□□□ 0.02
Pcdhga6Q91XY2 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhga6Q91XY2 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Pcdhga6Q91XY2 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhga6Q91XY2 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhga6Q91XY2 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Pcdhga6Q91XY2 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Pcdhga6Q91XY2 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhga6Q91XY2 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhga6Q91XY2 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhga6Q91XY2 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhga6Q91XY2 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhga6Q91XY2 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Pcdhga6Q91XY2 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhga6Q91XY2 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Pcdhga6Q91XY2 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhga6Q91XY2 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhga6Q91XY2 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhga6Q91XY2 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhga6Q91XY2 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhga6Q91XY2 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
Pcdhga6Q91XY2 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhga6Q91XY2 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhga6Q91XY2 Best4-ps-201ENSMUST00000129783 1380 ntBASIC15.16■□□□□ 0.02
Pcdhga6Q91XY2 Gm12428-201ENSMUST00000119844 727 ntBASIC15.16■□□□□ 0.02
Pcdhga6Q91XY2 Gm11745-201ENSMUST00000121669 448 ntBASIC15.16■□□□□ 0.02
Pcdhga6Q91XY2 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC15.16■□□□□ 0.02
Pcdhga6Q91XY2 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhga6Q91XY2 Gm18489-201ENSMUST00000172565 551 ntBASIC15.16■□□□□ 0.02
Pcdhga6Q91XY2 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC15.16■□□□□ 0.02
Pcdhga6Q91XY2 Gm9682-201ENSMUST00000197505 556 ntBASIC15.16■□□□□ 0.02
Pcdhga6Q91XY2 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC15.16■□□□□ 0.02
Pcdhga6Q91XY2 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC15.16■□□□□ 0.02
Pcdhga6Q91XY2 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC15.16■□□□□ 0.02
Pcdhga6Q91XY2 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhga6Q91XY2 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC15.16■□□□□ 0.02
Pcdhga6Q91XY2 AC151836.1-202ENSMUST00000226259 753 ntBASIC15.16■□□□□ 0.02
Pcdhga6Q91XY2 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhga6Q91XY2 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhga6Q91XY2 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Pcdhga6Q91XY2 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhga6Q91XY2 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhga6Q91XY2 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhga6Q91XY2 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhga6Q91XY2 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhga6Q91XY2 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhga6Q91XY2 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhga6Q91XY2 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms