Protein–RNA interactions for Protein: Q91V04

Tram1, Translocating chain-associated membrane protein 1, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tram1Q91V04 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Tram1Q91V04 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Tram1Q91V04 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Tram1Q91V04 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Tram1Q91V04 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Tram1Q91V04 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Tram1Q91V04 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Tram1Q91V04 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
Tram1Q91V04 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Tram1Q91V04 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Tram1Q91V04 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Tram1Q91V04 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Tram1Q91V04 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Tram1Q91V04 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Tram1Q91V04 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Tram1Q91V04 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Tram1Q91V04 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Tram1Q91V04 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Tram1Q91V04 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
Tram1Q91V04 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Tram1Q91V04 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Tram1Q91V04 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Tram1Q91V04 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Tram1Q91V04 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Tram1Q91V04 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Tram1Q91V04 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Tram1Q91V04 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
Tram1Q91V04 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Tram1Q91V04 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Tram1Q91V04 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Tram1Q91V04 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Tram1Q91V04 Gm13337-201ENSMUST00000119183 1594 ntBASIC13.13□□□□□ -0.31
Tram1Q91V04 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC13.13□□□□□ -0.31
Tram1Q91V04 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Tram1Q91V04 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC13.13□□□□□ -0.31
Tram1Q91V04 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Tram1Q91V04 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Tram1Q91V04 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC13.13□□□□□ -0.31
Tram1Q91V04 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Tram1Q91V04 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Tram1Q91V04 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Tram1Q91V04 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Tram1Q91V04 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Tram1Q91V04 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Tram1Q91V04 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Tram1Q91V04 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Tram1Q91V04 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Tram1Q91V04 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Tram1Q91V04 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Tram1Q91V04 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Tram1Q91V04 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Tram1Q91V04 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Tram1Q91V04 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tram1Q91V04 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Tram1Q91V04 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tram1Q91V04 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tram1Q91V04 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tram1Q91V04 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tram1Q91V04 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tram1Q91V04 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Tram1Q91V04 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tram1Q91V04 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC13.12□□□□□ -0.31
Tram1Q91V04 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tram1Q91V04 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tram1Q91V04 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC13.12□□□□□ -0.31
Tram1Q91V04 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tram1Q91V04 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tram1Q91V04 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC13.12□□□□□ -0.31
Tram1Q91V04 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tram1Q91V04 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tram1Q91V04 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
Tram1Q91V04 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC13.12□□□□□ -0.31
Tram1Q91V04 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tram1Q91V04 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Tram1Q91V04 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC13.12□□□□□ -0.31
Tram1Q91V04 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC13.12□□□□□ -0.31
Tram1Q91V04 AC164629.5-201ENSMUST00000220387 632 ntBASIC13.12□□□□□ -0.31
Tram1Q91V04 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Tram1Q91V04 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tram1Q91V04 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC13.12□□□□□ -0.31
Tram1Q91V04 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Tram1Q91V04 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tram1Q91V04 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC13.12□□□□□ -0.31
Tram1Q91V04 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tram1Q91V04 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tram1Q91V04 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Tram1Q91V04 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tram1Q91V04 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Tram1Q91V04 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tram1Q91V04 Ap5m1-205ENSMUST00000227431 3757 ntBASIC13.11□□□□□ -0.31
Tram1Q91V04 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Tram1Q91V04 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC13.11□□□□□ -0.31
Tram1Q91V04 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Tram1Q91V04 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Tram1Q91V04 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Tram1Q91V04 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Tram1Q91V04 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Tram1Q91V04 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC13.11□□□□□ -0.31
Tram1Q91V04 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Tram1Q91V04 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 60.2 ms