Protein–RNA interactions for Protein: Q8VI88

Odf4, Outer dense fiber protein 4, mousemouse

Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Odf4Q8VI88 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Odf4Q8VI88 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Odf4Q8VI88 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Odf4Q8VI88 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC13.69□□□□□ -0.22
Odf4Q8VI88 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Odf4Q8VI88 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC13.69□□□□□ -0.22
Odf4Q8VI88 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC13.69□□□□□ -0.22
Odf4Q8VI88 AC114585.2-202ENSMUST00000228094 426 ntBASIC13.69□□□□□ -0.22
Odf4Q8VI88 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Odf4Q8VI88 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Odf4Q8VI88 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Odf4Q8VI88 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Odf4Q8VI88 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Odf4Q8VI88 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Odf4Q8VI88 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Odf4Q8VI88 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Odf4Q8VI88 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Odf4Q8VI88 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC13.68□□□□□ -0.22
Odf4Q8VI88 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Odf4Q8VI88 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Odf4Q8VI88 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Odf4Q8VI88 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Odf4Q8VI88 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Odf4Q8VI88 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Odf4Q8VI88 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Odf4Q8VI88 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Odf4Q8VI88 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
Odf4Q8VI88 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Odf4Q8VI88 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC13.68□□□□□ -0.22
Odf4Q8VI88 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Odf4Q8VI88 Gm2651-201ENSMUST00000203560 838 ntBASIC13.68□□□□□ -0.22
Odf4Q8VI88 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Odf4Q8VI88 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Odf4Q8VI88 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC13.68□□□□□ -0.22
Odf4Q8VI88 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Odf4Q8VI88 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Odf4Q8VI88 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Odf4Q8VI88 Gm18856-201ENSMUST00000178096 1374 ntBASIC13.68□□□□□ -0.22
Odf4Q8VI88 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Odf4Q8VI88 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Odf4Q8VI88 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC13.68□□□□□ -0.22
Odf4Q8VI88 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Odf4Q8VI88 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC13.67□□□□□ -0.22
Odf4Q8VI88 Gm37728-201ENSMUST00000195025 2292 ntBASIC13.67□□□□□ -0.22
Odf4Q8VI88 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Odf4Q8VI88 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Odf4Q8VI88 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Odf4Q8VI88 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Odf4Q8VI88 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Odf4Q8VI88 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Odf4Q8VI88 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Odf4Q8VI88 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Odf4Q8VI88 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Odf4Q8VI88 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Odf4Q8VI88 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Odf4Q8VI88 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Odf4Q8VI88 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Odf4Q8VI88 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Odf4Q8VI88 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Odf4Q8VI88 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Odf4Q8VI88 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
Odf4Q8VI88 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Odf4Q8VI88 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Odf4Q8VI88 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC13.67□□□□□ -0.22
Odf4Q8VI88 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC13.67□□□□□ -0.22
Odf4Q8VI88 Gm25745-201ENSMUST00000174945 133 ntBASIC13.67□□□□□ -0.22
Odf4Q8VI88 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC13.67□□□□□ -0.22
Odf4Q8VI88 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC13.67□□□□□ -0.22
Odf4Q8VI88 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Odf4Q8VI88 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Odf4Q8VI88 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC13.67□□□□□ -0.22
Odf4Q8VI88 Gm6296-201ENSMUST00000222599 943 ntBASIC13.67□□□□□ -0.22
Odf4Q8VI88 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Odf4Q8VI88 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Odf4Q8VI88 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Odf4Q8VI88 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Odf4Q8VI88 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Odf4Q8VI88 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Odf4Q8VI88 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Odf4Q8VI88 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Odf4Q8VI88 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Odf4Q8VI88 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Odf4Q8VI88 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Odf4Q8VI88 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Odf4Q8VI88 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Odf4Q8VI88 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Odf4Q8VI88 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Odf4Q8VI88 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Odf4Q8VI88 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Odf4Q8VI88 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC13.66□□□□□ -0.22
Odf4Q8VI88 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Odf4Q8VI88 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Odf4Q8VI88 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Odf4Q8VI88 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Odf4Q8VI88 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Odf4Q8VI88 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Odf4Q8VI88 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Odf4Q8VI88 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Odf4Q8VI88 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Odf4Q8VI88 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms