Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC15.79■□□□□ 0.12
Trim60Q8VI40 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC15.79■□□□□ 0.12
Trim60Q8VI40 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
Trim60Q8VI40 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trim60Q8VI40 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim60Q8VI40 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Trim60Q8VI40 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim60Q8VI40 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim60Q8VI40 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trim60Q8VI40 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC15.79■□□□□ 0.12
Trim60Q8VI40 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trim60Q8VI40 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim60Q8VI40 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim60Q8VI40 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC15.78■□□□□ 0.12
Trim60Q8VI40 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim60Q8VI40 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim60Q8VI40 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim60Q8VI40 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim60Q8VI40 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC15.78■□□□□ 0.12
Trim60Q8VI40 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC15.78■□□□□ 0.12
Trim60Q8VI40 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC15.78■□□□□ 0.12
Trim60Q8VI40 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Trim60Q8VI40 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trim60Q8VI40 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trim60Q8VI40 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trim60Q8VI40 Gm8655-201ENSMUST00000221159 852 ntBASIC15.78■□□□□ 0.12
Trim60Q8VI40 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trim60Q8VI40 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim60Q8VI40 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trim60Q8VI40 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim60Q8VI40 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Trim60Q8VI40 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim60Q8VI40 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim60Q8VI40 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim60Q8VI40 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim60Q8VI40 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trim60Q8VI40 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC15.77■□□□□ 0.12
Trim60Q8VI40 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trim60Q8VI40 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Trim60Q8VI40 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trim60Q8VI40 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trim60Q8VI40 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trim60Q8VI40 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trim60Q8VI40 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trim60Q8VI40 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Trim60Q8VI40 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trim60Q8VI40 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trim60Q8VI40 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
Trim60Q8VI40 Gm15372-201ENSMUST00000120729 834 ntBASIC15.77■□□□□ 0.12
Trim60Q8VI40 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC15.77■□□□□ 0.12
Trim60Q8VI40 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC15.77■□□□□ 0.12
Trim60Q8VI40 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
Trim60Q8VI40 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Trim60Q8VI40 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trim60Q8VI40 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trim60Q8VI40 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Trim60Q8VI40 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trim60Q8VI40 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trim60Q8VI40 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC15.77■□□□□ 0.11
Trim60Q8VI40 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trim60Q8VI40 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trim60Q8VI40 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
Trim60Q8VI40 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC15.77■□□□□ 0.11
Trim60Q8VI40 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trim60Q8VI40 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trim60Q8VI40 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trim60Q8VI40 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trim60Q8VI40 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trim60Q8VI40 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Trim60Q8VI40 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trim60Q8VI40 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trim60Q8VI40 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC15.76■□□□□ 0.11
Trim60Q8VI40 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trim60Q8VI40 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Trim60Q8VI40 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Trim60Q8VI40 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trim60Q8VI40 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trim60Q8VI40 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trim60Q8VI40 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trim60Q8VI40 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Trim60Q8VI40 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC15.76■□□□□ 0.11
Trim60Q8VI40 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Trim60Q8VI40 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trim60Q8VI40 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trim60Q8VI40 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Trim60Q8VI40 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trim60Q8VI40 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trim60Q8VI40 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trim60Q8VI40 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC15.76■□□□□ 0.11
Trim60Q8VI40 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trim60Q8VI40 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trim60Q8VI40 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC15.76■□□□□ 0.11
Trim60Q8VI40 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trim60Q8VI40 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trim60Q8VI40 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trim60Q8VI40 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trim60Q8VI40 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trim60Q8VI40 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trim60Q8VI40 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Trim60Q8VI40 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms