Protein–RNA interactions for Protein: Q8VHQ4

Rab40c, Ras-related protein Rab-40C, mousemouse

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab40cQ8VHQ4 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC12.48□□□□□ -0.41
Rab40cQ8VHQ4 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rab40cQ8VHQ4 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Rab40cQ8VHQ4 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rab40cQ8VHQ4 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Rab40cQ8VHQ4 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rab40cQ8VHQ4 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Rab40cQ8VHQ4 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rab40cQ8VHQ4 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Rab40cQ8VHQ4 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rab40cQ8VHQ4 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC12.47□□□□□ -0.41
Rab40cQ8VHQ4 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rab40cQ8VHQ4 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Rab40cQ8VHQ4 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rab40cQ8VHQ4 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rab40cQ8VHQ4 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rab40cQ8VHQ4 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Rab40cQ8VHQ4 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rab40cQ8VHQ4 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC12.47□□□□□ -0.41
Rab40cQ8VHQ4 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
Rab40cQ8VHQ4 Gm14722-201ENSMUST00000118943 689 ntBASIC12.47□□□□□ -0.41
Rab40cQ8VHQ4 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC12.47□□□□□ -0.41
Rab40cQ8VHQ4 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC12.47□□□□□ -0.41
Rab40cQ8VHQ4 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rab40cQ8VHQ4 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC12.47□□□□□ -0.41
Rab40cQ8VHQ4 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Rab40cQ8VHQ4 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rab40cQ8VHQ4 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Rab40cQ8VHQ4 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Rab40cQ8VHQ4 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rab40cQ8VHQ4 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Rab40cQ8VHQ4 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rab40cQ8VHQ4 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rab40cQ8VHQ4 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC12.47□□□□□ -0.41
Rab40cQ8VHQ4 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rab40cQ8VHQ4 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Rab40cQ8VHQ4 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC12.47□□□□□ -0.41
Rab40cQ8VHQ4 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rab40cQ8VHQ4 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rab40cQ8VHQ4 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Rab40cQ8VHQ4 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Rab40cQ8VHQ4 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Rab40cQ8VHQ4 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Rab40cQ8VHQ4 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Rab40cQ8VHQ4 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Rab40cQ8VHQ4 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC12.46□□□□□ -0.41
Rab40cQ8VHQ4 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC12.46□□□□□ -0.41
Rab40cQ8VHQ4 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Rab40cQ8VHQ4 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Rab40cQ8VHQ4 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Rab40cQ8VHQ4 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
Rab40cQ8VHQ4 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC12.46□□□□□ -0.41
Rab40cQ8VHQ4 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Rab40cQ8VHQ4 Gm27389-201ENSMUST00000183622 195 ntBASIC12.46□□□□□ -0.41
Rab40cQ8VHQ4 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC12.46□□□□□ -0.41
Rab40cQ8VHQ4 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC12.46□□□□□ -0.41
Rab40cQ8VHQ4 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Rab40cQ8VHQ4 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Rab40cQ8VHQ4 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Rab40cQ8VHQ4 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Rab40cQ8VHQ4 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Rab40cQ8VHQ4 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Rab40cQ8VHQ4 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC12.46□□□□□ -0.42
Rab40cQ8VHQ4 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC12.46□□□□□ -0.42
Rab40cQ8VHQ4 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Rab40cQ8VHQ4 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Rab40cQ8VHQ4 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Rab40cQ8VHQ4 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Rab40cQ8VHQ4 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Rab40cQ8VHQ4 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Rab40cQ8VHQ4 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Rab40cQ8VHQ4 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Rab40cQ8VHQ4 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC12.46□□□□□ -0.42
Rab40cQ8VHQ4 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Rab40cQ8VHQ4 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Rab40cQ8VHQ4 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Rab40cQ8VHQ4 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Rab40cQ8VHQ4 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Rab40cQ8VHQ4 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rab40cQ8VHQ4 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rab40cQ8VHQ4 Ap5m1-205ENSMUST00000227431 3757 ntBASIC12.45□□□□□ -0.42
Rab40cQ8VHQ4 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rab40cQ8VHQ4 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rab40cQ8VHQ4 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rab40cQ8VHQ4 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Rab40cQ8VHQ4 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Rab40cQ8VHQ4 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rab40cQ8VHQ4 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Rab40cQ8VHQ4 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC12.45□□□□□ -0.42
Rab40cQ8VHQ4 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC12.45□□□□□ -0.42
Rab40cQ8VHQ4 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Rab40cQ8VHQ4 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC12.45□□□□□ -0.42
Rab40cQ8VHQ4 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC12.45□□□□□ -0.42
Rab40cQ8VHQ4 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Rab40cQ8VHQ4 Mir5130-201ENSMUST00000175160 84 ntBASIC12.45□□□□□ -0.42
Rab40cQ8VHQ4 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC12.45□□□□□ -0.42
Rab40cQ8VHQ4 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC12.45□□□□□ -0.42
Rab40cQ8VHQ4 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC12.45□□□□□ -0.42
Rab40cQ8VHQ4 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rab40cQ8VHQ4 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms