Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Vps39Q8R5L3 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC15.3■□□□□ 0.04
Vps39Q8R5L3 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vps39Q8R5L3 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC15.3■□□□□ 0.04
Vps39Q8R5L3 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Vps39Q8R5L3 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vps39Q8R5L3 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vps39Q8R5L3 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vps39Q8R5L3 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
Vps39Q8R5L3 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vps39Q8R5L3 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC15.3■□□□□ 0.04
Vps39Q8R5L3 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vps39Q8R5L3 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vps39Q8R5L3 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Vps39Q8R5L3 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vps39Q8R5L3 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vps39Q8R5L3 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Vps39Q8R5L3 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vps39Q8R5L3 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vps39Q8R5L3 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Vps39Q8R5L3 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vps39Q8R5L3 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Vps39Q8R5L3 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vps39Q8R5L3 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Vps39Q8R5L3 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC15.29■□□□□ 0.04
Vps39Q8R5L3 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vps39Q8R5L3 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vps39Q8R5L3 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vps39Q8R5L3 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vps39Q8R5L3 Gm8097-201ENSMUST00000117903 829 ntBASIC15.29■□□□□ 0.04
Vps39Q8R5L3 Gm15358-201ENSMUST00000119249 520 ntBASIC15.29■□□□□ 0.04
Vps39Q8R5L3 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC15.29■□□□□ 0.04
Vps39Q8R5L3 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC15.29■□□□□ 0.04
Vps39Q8R5L3 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC15.29■□□□□ 0.04
Vps39Q8R5L3 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vps39Q8R5L3 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Vps39Q8R5L3 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vps39Q8R5L3 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Vps39Q8R5L3 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vps39Q8R5L3 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Vps39Q8R5L3 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Vps39Q8R5L3 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vps39Q8R5L3 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Vps39Q8R5L3 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vps39Q8R5L3 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vps39Q8R5L3 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vps39Q8R5L3 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vps39Q8R5L3 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vps39Q8R5L3 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC15.29■□□□□ 0.04
Vps39Q8R5L3 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vps39Q8R5L3 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vps39Q8R5L3 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vps39Q8R5L3 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vps39Q8R5L3 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vps39Q8R5L3 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vps39Q8R5L3 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC15.28■□□□□ 0.04
Vps39Q8R5L3 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vps39Q8R5L3 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Vps39Q8R5L3 Grk6-207ENSMUST00000225925 2769 ntBASIC15.28■□□□□ 0.04
Vps39Q8R5L3 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vps39Q8R5L3 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vps39Q8R5L3 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vps39Q8R5L3 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Vps39Q8R5L3 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vps39Q8R5L3 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vps39Q8R5L3 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vps39Q8R5L3 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vps39Q8R5L3 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Vps39Q8R5L3 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC15.28■□□□□ 0.04
Vps39Q8R5L3 Gm18669-201ENSMUST00000216049 778 ntBASIC15.28■□□□□ 0.04
Vps39Q8R5L3 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vps39Q8R5L3 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vps39Q8R5L3 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Vps39Q8R5L3 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vps39Q8R5L3 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Vps39Q8R5L3 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC15.28■□□□□ 0.04
Vps39Q8R5L3 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vps39Q8R5L3 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Vps39Q8R5L3 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vps39Q8R5L3 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vps39Q8R5L3 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vps39Q8R5L3 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Vps39Q8R5L3 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Vps39Q8R5L3 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC15.27■□□□□ 0.04
Vps39Q8R5L3 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Vps39Q8R5L3 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC15.27■□□□□ 0.04
Vps39Q8R5L3 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Vps39Q8R5L3 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Vps39Q8R5L3 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Vps39Q8R5L3 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Vps39Q8R5L3 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Vps39Q8R5L3 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Vps39Q8R5L3 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Vps39Q8R5L3 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC15.27■□□□□ 0.04
Vps39Q8R5L3 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Vps39Q8R5L3 AC093926.2-201ENSMUST00000214468 1228 ntBASIC15.27■□□□□ 0.04
Vps39Q8R5L3 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC15.27■□□□□ 0.04
Vps39Q8R5L3 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Vps39Q8R5L3 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Vps39Q8R5L3 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms