Protein–RNA interactions for Protein: Q8R4U6

Top1mt, DNA topoisomerase I, mitochondrial, mousemouse

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Top1mtQ8R4U6 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Top1mtQ8R4U6 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC18.24■□□□□ 0.51
Top1mtQ8R4U6 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Top1mtQ8R4U6 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Top1mtQ8R4U6 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Top1mtQ8R4U6 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Top1mtQ8R4U6 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Top1mtQ8R4U6 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC18.23■□□□□ 0.51
Top1mtQ8R4U6 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Top1mtQ8R4U6 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Top1mtQ8R4U6 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Top1mtQ8R4U6 Ptprs-211ENSMUST00000223859 5588 ntBASIC18.23■□□□□ 0.51
Top1mtQ8R4U6 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Top1mtQ8R4U6 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Top1mtQ8R4U6 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Top1mtQ8R4U6 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC18.23■□□□□ 0.51
Top1mtQ8R4U6 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC18.23■□□□□ 0.51
Top1mtQ8R4U6 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC18.23■□□□□ 0.51
Top1mtQ8R4U6 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Top1mtQ8R4U6 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Top1mtQ8R4U6 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Top1mtQ8R4U6 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Top1mtQ8R4U6 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Top1mtQ8R4U6 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Top1mtQ8R4U6 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Top1mtQ8R4U6 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Top1mtQ8R4U6 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Top1mtQ8R4U6 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Top1mtQ8R4U6 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Top1mtQ8R4U6 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Top1mtQ8R4U6 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Top1mtQ8R4U6 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Top1mtQ8R4U6 Gm11764-201ENSMUST00000120221 623 ntBASIC18.22■□□□□ 0.51
Top1mtQ8R4U6 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Top1mtQ8R4U6 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Top1mtQ8R4U6 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Top1mtQ8R4U6 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC18.22■□□□□ 0.51
Top1mtQ8R4U6 AC147366.1-201ENSMUST00000227671 852 ntBASIC18.22■□□□□ 0.51
Top1mtQ8R4U6 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Top1mtQ8R4U6 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
Top1mtQ8R4U6 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Top1mtQ8R4U6 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Top1mtQ8R4U6 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC18.22■□□□□ 0.51
Top1mtQ8R4U6 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Top1mtQ8R4U6 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Top1mtQ8R4U6 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC18.22■□□□□ 0.51
Top1mtQ8R4U6 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC18.22■□□□□ 0.51
Top1mtQ8R4U6 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Top1mtQ8R4U6 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Top1mtQ8R4U6 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Top1mtQ8R4U6 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Top1mtQ8R4U6 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Top1mtQ8R4U6 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Top1mtQ8R4U6 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Top1mtQ8R4U6 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Top1mtQ8R4U6 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Top1mtQ8R4U6 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Top1mtQ8R4U6 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Top1mtQ8R4U6 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Top1mtQ8R4U6 Gm5184-201ENSMUST00000220417 1702 ntBASIC18.21■□□□□ 0.51
Top1mtQ8R4U6 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Top1mtQ8R4U6 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC18.21■□□□□ 0.51
Top1mtQ8R4U6 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Top1mtQ8R4U6 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Top1mtQ8R4U6 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC18.21■□□□□ 0.51
Top1mtQ8R4U6 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC18.21■□□□□ 0.51
Top1mtQ8R4U6 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Top1mtQ8R4U6 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Top1mtQ8R4U6 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC18.21■□□□□ 0.51
Top1mtQ8R4U6 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Top1mtQ8R4U6 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Top1mtQ8R4U6 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Top1mtQ8R4U6 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC18.21■□□□□ 0.51
Top1mtQ8R4U6 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Top1mtQ8R4U6 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC18.21■□□□□ 0.51
Top1mtQ8R4U6 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Top1mtQ8R4U6 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Top1mtQ8R4U6 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Top1mtQ8R4U6 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Top1mtQ8R4U6 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Top1mtQ8R4U6 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Top1mtQ8R4U6 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Top1mtQ8R4U6 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Top1mtQ8R4U6 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Top1mtQ8R4U6 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Top1mtQ8R4U6 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Top1mtQ8R4U6 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Top1mtQ8R4U6 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Top1mtQ8R4U6 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Top1mtQ8R4U6 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Top1mtQ8R4U6 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
Top1mtQ8R4U6 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Top1mtQ8R4U6 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Top1mtQ8R4U6 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Top1mtQ8R4U6 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Top1mtQ8R4U6 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC18.2■□□□□ 0.5
Top1mtQ8R4U6 Gm30437-201ENSMUST00000206086 1201 ntBASIC18.2■□□□□ 0.5
Top1mtQ8R4U6 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC18.2■□□□□ 0.5
Top1mtQ8R4U6 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Top1mtQ8R4U6 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms