Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Nup35Q8R4R6 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Nup35Q8R4R6 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Nup35Q8R4R6 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC12.45□□□□□ -0.42
Nup35Q8R4R6 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Nup35Q8R4R6 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nup35Q8R4R6 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nup35Q8R4R6 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Nup35Q8R4R6 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nup35Q8R4R6 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC12.45□□□□□ -0.42
Nup35Q8R4R6 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nup35Q8R4R6 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nup35Q8R4R6 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nup35Q8R4R6 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nup35Q8R4R6 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nup35Q8R4R6 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nup35Q8R4R6 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nup35Q8R4R6 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC12.45□□□□□ -0.42
Nup35Q8R4R6 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Nup35Q8R4R6 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Nup35Q8R4R6 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC12.45□□□□□ -0.42
Nup35Q8R4R6 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nup35Q8R4R6 Krtap5-1-202ENSMUST00000188274 742 ntBASIC12.45□□□□□ -0.42
Nup35Q8R4R6 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Nup35Q8R4R6 Gm18101-201ENSMUST00000215769 548 ntBASIC12.45□□□□□ -0.42
Nup35Q8R4R6 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nup35Q8R4R6 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nup35Q8R4R6 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nup35Q8R4R6 Gm38042-201ENSMUST00000191614 5208 ntBASIC12.45□□□□□ -0.42
Nup35Q8R4R6 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nup35Q8R4R6 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nup35Q8R4R6 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC12.45□□□□□ -0.42
Nup35Q8R4R6 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nup35Q8R4R6 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC12.45□□□□□ -0.42
Nup35Q8R4R6 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nup35Q8R4R6 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Nup35Q8R4R6 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Nup35Q8R4R6 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Nup35Q8R4R6 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nup35Q8R4R6 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Nup35Q8R4R6 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nup35Q8R4R6 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nup35Q8R4R6 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Nup35Q8R4R6 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nup35Q8R4R6 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nup35Q8R4R6 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Nup35Q8R4R6 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Nup35Q8R4R6 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Nup35Q8R4R6 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nup35Q8R4R6 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nup35Q8R4R6 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nup35Q8R4R6 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nup35Q8R4R6 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nup35Q8R4R6 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Nup35Q8R4R6 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Nup35Q8R4R6 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nup35Q8R4R6 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Nup35Q8R4R6 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nup35Q8R4R6 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nup35Q8R4R6 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nup35Q8R4R6 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nup35Q8R4R6 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Nup35Q8R4R6 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC12.44□□□□□ -0.42
Nup35Q8R4R6 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nup35Q8R4R6 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC12.44□□□□□ -0.42
Nup35Q8R4R6 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Nup35Q8R4R6 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC12.44□□□□□ -0.42
Nup35Q8R4R6 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC12.44□□□□□ -0.42
Nup35Q8R4R6 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Nup35Q8R4R6 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC12.44□□□□□ -0.42
Nup35Q8R4R6 Gm8349-201ENSMUST00000182720 1003 ntBASIC12.44□□□□□ -0.42
Nup35Q8R4R6 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC12.44□□□□□ -0.42
Nup35Q8R4R6 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC12.44□□□□□ -0.42
Nup35Q8R4R6 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Nup35Q8R4R6 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nup35Q8R4R6 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nup35Q8R4R6 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Nup35Q8R4R6 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC12.44□□□□□ -0.42
Nup35Q8R4R6 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC12.44□□□□□ -0.42
Nup35Q8R4R6 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nup35Q8R4R6 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nup35Q8R4R6 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Nup35Q8R4R6 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nup35Q8R4R6 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nup35Q8R4R6 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nup35Q8R4R6 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nup35Q8R4R6 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nup35Q8R4R6 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nup35Q8R4R6 Gm4609-201ENSMUST00000106443 1002 ntBASIC12.43□□□□□ -0.42
Nup35Q8R4R6 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
Nup35Q8R4R6 Gm5138-201ENSMUST00000113842 1002 ntBASIC12.43□□□□□ -0.42
Nup35Q8R4R6 Gm15191-201ENSMUST00000117933 1000 ntBASIC12.43□□□□□ -0.42
Nup35Q8R4R6 Gm12182-201ENSMUST00000118655 1008 ntBASIC12.43□□□□□ -0.42
Nup35Q8R4R6 Gm13882-201ENSMUST00000120886 1002 ntBASIC12.43□□□□□ -0.42
Nup35Q8R4R6 Gm10284-201ENSMUST00000145057 1005 ntBASIC12.43□□□□□ -0.42
Nup35Q8R4R6 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC12.43□□□□□ -0.42
Nup35Q8R4R6 Gm10481-201ENSMUST00000179228 1002 ntBASIC12.43□□□□□ -0.42
Nup35Q8R4R6 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC12.43□□□□□ -0.42
Nup35Q8R4R6 Gm2574-201ENSMUST00000181051 1002 ntBASIC12.43□□□□□ -0.42
Nup35Q8R4R6 Gm3200-201ENSMUST00000181493 1002 ntBASIC12.43□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms