Protein–RNA interactions for Protein: Q8R4G9

Chrna3, Neuronal acetylcholine receptor subunit alpha-3, mousemouse

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna3Q8R4G9 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Chrna3Q8R4G9 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Chrna3Q8R4G9 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Chrna3Q8R4G9 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Chrna3Q8R4G9 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC14.97□□□□□ -0.01
Chrna3Q8R4G9 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Chrna3Q8R4G9 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Chrna3Q8R4G9 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Chrna3Q8R4G9 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Chrna3Q8R4G9 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Chrna3Q8R4G9 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC14.97□□□□□ -0.01
Chrna3Q8R4G9 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Chrna3Q8R4G9 Gm11594-201ENSMUST00000122313 162 ntBASIC14.97□□□□□ -0.01
Chrna3Q8R4G9 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC14.97□□□□□ -0.01
Chrna3Q8R4G9 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Chrna3Q8R4G9 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Chrna3Q8R4G9 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Chrna3Q8R4G9 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC14.97□□□□□ -0.01
Chrna3Q8R4G9 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Chrna3Q8R4G9 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Chrna3Q8R4G9 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC14.97□□□□□ -0.01
Chrna3Q8R4G9 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Chrna3Q8R4G9 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Chrna3Q8R4G9 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
Chrna3Q8R4G9 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Chrna3Q8R4G9 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Chrna3Q8R4G9 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Chrna3Q8R4G9 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Chrna3Q8R4G9 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Chrna3Q8R4G9 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Chrna3Q8R4G9 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Chrna3Q8R4G9 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Chrna3Q8R4G9 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Chrna3Q8R4G9 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC14.97□□□□□ -0.01
Chrna3Q8R4G9 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Chrna3Q8R4G9 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Chrna3Q8R4G9 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Chrna3Q8R4G9 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
Chrna3Q8R4G9 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Chrna3Q8R4G9 AC093043.3-201ENSMUST00000226531 2273 ntBASIC14.96□□□□□ -0.01
Chrna3Q8R4G9 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC14.96□□□□□ -0.01
Chrna3Q8R4G9 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Chrna3Q8R4G9 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Chrna3Q8R4G9 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Chrna3Q8R4G9 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Chrna3Q8R4G9 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Chrna3Q8R4G9 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Chrna3Q8R4G9 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC14.96□□□□□ -0.01
Chrna3Q8R4G9 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Chrna3Q8R4G9 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.01
Chrna3Q8R4G9 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC14.96□□□□□ -0.01
Chrna3Q8R4G9 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Chrna3Q8R4G9 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC14.96□□□□□ -0.01
Chrna3Q8R4G9 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC14.96□□□□□ -0.01
Chrna3Q8R4G9 Mir8117-201ENSMUST00000184773 107 ntBASIC14.96□□□□□ -0.01
Chrna3Q8R4G9 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Chrna3Q8R4G9 Gm43598-201ENSMUST00000202482 2479 ntBASIC14.96□□□□□ -0.01
Chrna3Q8R4G9 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Chrna3Q8R4G9 AC174742.1-201ENSMUST00000218272 304 ntBASIC14.96□□□□□ -0.01
Chrna3Q8R4G9 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Chrna3Q8R4G9 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Chrna3Q8R4G9 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Chrna3Q8R4G9 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Chrna3Q8R4G9 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC14.96□□□□□ -0.02
Chrna3Q8R4G9 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
Chrna3Q8R4G9 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Chrna3Q8R4G9 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Chrna3Q8R4G9 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Chrna3Q8R4G9 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Chrna3Q8R4G9 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Chrna3Q8R4G9 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Chrna3Q8R4G9 Gm13294-201ENSMUST00000121757 1330 ntBASIC14.95□□□□□ -0.02
Chrna3Q8R4G9 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Chrna3Q8R4G9 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Chrna3Q8R4G9 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Chrna3Q8R4G9 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Chrna3Q8R4G9 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Chrna3Q8R4G9 Gm44616-201ENSMUST00000206417 1732 ntBASIC14.95□□□□□ -0.02
Chrna3Q8R4G9 Gm7901-201ENSMUST00000120430 1597 ntBASIC14.95□□□□□ -0.02
Chrna3Q8R4G9 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Chrna3Q8R4G9 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC14.95□□□□□ -0.02
Chrna3Q8R4G9 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Chrna3Q8R4G9 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Chrna3Q8R4G9 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC14.95□□□□□ -0.02
Chrna3Q8R4G9 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Chrna3Q8R4G9 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC14.95□□□□□ -0.02
Chrna3Q8R4G9 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Chrna3Q8R4G9 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC14.95□□□□□ -0.02
Chrna3Q8R4G9 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC14.95□□□□□ -0.02
Chrna3Q8R4G9 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Chrna3Q8R4G9 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC14.95□□□□□ -0.02
Chrna3Q8R4G9 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Chrna3Q8R4G9 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Chrna3Q8R4G9 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Chrna3Q8R4G9 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC14.95□□□□□ -0.02
Chrna3Q8R4G9 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Chrna3Q8R4G9 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Chrna3Q8R4G9 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Chrna3Q8R4G9 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Chrna3Q8R4G9 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 63.3 ms