Protein–RNA interactions for Protein: Q8R422

Cd109, CD109 antigen, mousemouse

Predictions only

Length 1,442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd109Q8R422 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Cd109Q8R422 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
Cd109Q8R422 AC164565.1-201ENSMUST00000217520 1484 ntBASIC21.45■■□□□ 1.03
Cd109Q8R422 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Cd109Q8R422 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
Cd109Q8R422 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Cd109Q8R422 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
Cd109Q8R422 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Cd109Q8R422 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
Cd109Q8R422 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
Cd109Q8R422 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Cd109Q8R422 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Cd109Q8R422 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC21.45■■□□□ 1.02
Cd109Q8R422 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC21.45■■□□□ 1.02
Cd109Q8R422 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC21.45■■□□□ 1.02
Cd109Q8R422 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC21.45■■□□□ 1.02
Cd109Q8R422 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC21.45■■□□□ 1.02
Cd109Q8R422 Mir7684-201ENSMUST00000183858 60 ntBASIC21.45■■□□□ 1.02
Cd109Q8R422 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Cd109Q8R422 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
Cd109Q8R422 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Cd109Q8R422 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Cd109Q8R422 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Cd109Q8R422 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
Cd109Q8R422 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Cd109Q8R422 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC21.44■■□□□ 1.02
Cd109Q8R422 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC21.44■■□□□ 1.02
Cd109Q8R422 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Cd109Q8R422 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Cd109Q8R422 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Cd109Q8R422 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Cd109Q8R422 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
Cd109Q8R422 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Cd109Q8R422 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Cd109Q8R422 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Cd109Q8R422 Gm6539-201ENSMUST00000119157 1064 ntBASIC21.44■■□□□ 1.02
Cd109Q8R422 Gm27533-201ENSMUST00000183800 152 ntBASIC21.44■■□□□ 1.02
Cd109Q8R422 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Cd109Q8R422 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
Cd109Q8R422 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Cd109Q8R422 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Cd109Q8R422 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC21.43■■□□□ 1.02
Cd109Q8R422 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Cd109Q8R422 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
Cd109Q8R422 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
Cd109Q8R422 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Cd109Q8R422 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC21.43■■□□□ 1.02
Cd109Q8R422 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC21.43■■□□□ 1.02
Cd109Q8R422 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
Cd109Q8R422 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Cd109Q8R422 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Cd109Q8R422 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
Cd109Q8R422 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
Cd109Q8R422 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Cd109Q8R422 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Cd109Q8R422 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Cd109Q8R422 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Cd109Q8R422 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Cd109Q8R422 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Cd109Q8R422 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Cd109Q8R422 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Cd109Q8R422 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Cd109Q8R422 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Cd109Q8R422 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC21.42■■□□□ 1.02
Cd109Q8R422 Mir8102-201ENSMUST00000184148 139 ntBASIC21.42■■□□□ 1.02
Cd109Q8R422 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Cd109Q8R422 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC21.42■■□□□ 1.02
Cd109Q8R422 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Cd109Q8R422 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Cd109Q8R422 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Cd109Q8R422 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Cd109Q8R422 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Cd109Q8R422 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Cd109Q8R422 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Cd109Q8R422 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
Cd109Q8R422 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
Cd109Q8R422 Gm5479-201ENSMUST00000160578 435 ntBASIC21.41■■□□□ 1.02
Cd109Q8R422 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC21.41■■□□□ 1.02
Cd109Q8R422 Gm9063-201ENSMUST00000223299 582 ntBASIC21.41■■□□□ 1.02
Cd109Q8R422 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC21.41■■□□□ 1.02
Cd109Q8R422 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC21.41■■□□□ 1.02
Cd109Q8R422 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
Cd109Q8R422 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Cd109Q8R422 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Cd109Q8R422 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Cd109Q8R422 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
Cd109Q8R422 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
Cd109Q8R422 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Cd109Q8R422 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Cd109Q8R422 Ccdc166-201ENSMUST00000182172 2584 ntBASIC21.4■■□□□ 1.02
Cd109Q8R422 Gm14767-201ENSMUST00000121559 586 ntBASIC21.4■■□□□ 1.02
Cd109Q8R422 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC21.4■■□□□ 1.02
Cd109Q8R422 Gm27989-201ENSMUST00000184721 107 ntBASIC21.4■■□□□ 1.02
Cd109Q8R422 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC21.4■■□□□ 1.02
Cd109Q8R422 Gm7775-201ENSMUST00000218871 853 ntBASIC21.4■■□□□ 1.02
Cd109Q8R422 Gm2423-201ENSMUST00000074863 733 ntBASIC21.4■■□□□ 1.02
Cd109Q8R422 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Cd109Q8R422 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Cd109Q8R422 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Cd109Q8R422 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms