Protein–RNA interactions for Protein: Q8R2T8

Gtf3c5, General transcription factor 3C polypeptide 5, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf3c5Q8R2T8 Gm2651-201ENSMUST00000203560 838 ntBASIC17.93■□□□□ 0.46
Gtf3c5Q8R2T8 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Gtf3c5Q8R2T8 AC159106.1-201ENSMUST00000224421 690 ntBASIC17.93■□□□□ 0.46
Gtf3c5Q8R2T8 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC17.93■□□□□ 0.46
Gtf3c5Q8R2T8 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Gtf3c5Q8R2T8 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Gtf3c5Q8R2T8 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Gtf3c5Q8R2T8 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
Gtf3c5Q8R2T8 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC17.93■□□□□ 0.46
Gtf3c5Q8R2T8 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Gtf3c5Q8R2T8 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC17.93■□□□□ 0.46
Gtf3c5Q8R2T8 AC157650.3-201ENSMUST00000225058 1476 ntBASIC17.93■□□□□ 0.46
Gtf3c5Q8R2T8 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Gtf3c5Q8R2T8 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Gtf3c5Q8R2T8 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Gtf3c5Q8R2T8 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Gtf3c5Q8R2T8 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Gtf3c5Q8R2T8 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Gtf3c5Q8R2T8 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Gtf3c5Q8R2T8 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Gtf3c5Q8R2T8 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Gtf3c5Q8R2T8 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Gtf3c5Q8R2T8 AC153526.5-201ENSMUST00000218661 2147 ntBASIC17.92■□□□□ 0.46
Gtf3c5Q8R2T8 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Gtf3c5Q8R2T8 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Gtf3c5Q8R2T8 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Gtf3c5Q8R2T8 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Gtf3c5Q8R2T8 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Gtf3c5Q8R2T8 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Gtf3c5Q8R2T8 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC17.92■□□□□ 0.46
Gtf3c5Q8R2T8 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Gtf3c5Q8R2T8 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
Gtf3c5Q8R2T8 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Gtf3c5Q8R2T8 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC17.92■□□□□ 0.46
Gtf3c5Q8R2T8 AC159093.1-201ENSMUST00000227779 380 ntBASIC17.92■□□□□ 0.46
Gtf3c5Q8R2T8 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC17.92■□□□□ 0.46
Gtf3c5Q8R2T8 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Gtf3c5Q8R2T8 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Gtf3c5Q8R2T8 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Gtf3c5Q8R2T8 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Gtf3c5Q8R2T8 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Gtf3c5Q8R2T8 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Gtf3c5Q8R2T8 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Gtf3c5Q8R2T8 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Gtf3c5Q8R2T8 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Gtf3c5Q8R2T8 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Gtf3c5Q8R2T8 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Gtf3c5Q8R2T8 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Gtf3c5Q8R2T8 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC17.91■□□□□ 0.46
Gtf3c5Q8R2T8 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Gtf3c5Q8R2T8 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Gtf3c5Q8R2T8 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Gtf3c5Q8R2T8 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Gtf3c5Q8R2T8 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Gtf3c5Q8R2T8 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Gtf3c5Q8R2T8 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Gtf3c5Q8R2T8 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Gtf3c5Q8R2T8 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Gtf3c5Q8R2T8 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC17.91■□□□□ 0.46
Gtf3c5Q8R2T8 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Gtf3c5Q8R2T8 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC17.91■□□□□ 0.46
Gtf3c5Q8R2T8 AC084391.1-201ENSMUST00000200651 141 ntBASIC17.91■□□□□ 0.46
Gtf3c5Q8R2T8 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Gtf3c5Q8R2T8 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC17.91■□□□□ 0.46
Gtf3c5Q8R2T8 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Gtf3c5Q8R2T8 Gm10584-201ENSMUST00000207036 2628 ntBASIC17.91■□□□□ 0.46
Gtf3c5Q8R2T8 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Gtf3c5Q8R2T8 Gm13337-201ENSMUST00000119183 1594 ntBASIC17.91■□□□□ 0.46
Gtf3c5Q8R2T8 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Gtf3c5Q8R2T8 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Gtf3c5Q8R2T8 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Gtf3c5Q8R2T8 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Gtf3c5Q8R2T8 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Gtf3c5Q8R2T8 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Gtf3c5Q8R2T8 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Gtf3c5Q8R2T8 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Gtf3c5Q8R2T8 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Gtf3c5Q8R2T8 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Gtf3c5Q8R2T8 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Gtf3c5Q8R2T8 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Gtf3c5Q8R2T8 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Gtf3c5Q8R2T8 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Gtf3c5Q8R2T8 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC17.9■□□□□ 0.46
Gtf3c5Q8R2T8 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC17.9■□□□□ 0.46
Gtf3c5Q8R2T8 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC17.9■□□□□ 0.46
Gtf3c5Q8R2T8 Gm7787-201ENSMUST00000216858 688 ntBASIC17.9■□□□□ 0.46
Gtf3c5Q8R2T8 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Gtf3c5Q8R2T8 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Gtf3c5Q8R2T8 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Gtf3c5Q8R2T8 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Gtf3c5Q8R2T8 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Gtf3c5Q8R2T8 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Gtf3c5Q8R2T8 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Gtf3c5Q8R2T8 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC17.9■□□□□ 0.46
Gtf3c5Q8R2T8 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Gtf3c5Q8R2T8 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Gtf3c5Q8R2T8 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Gtf3c5Q8R2T8 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC17.9■□□□□ 0.46
Gtf3c5Q8R2T8 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Gtf3c5Q8R2T8 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms