Protein–RNA interactions for Protein: Q8R2Q0

Trim29, Tripartite motif-containing protein 29, mousemouse

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim29Q8R2Q0 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim29Q8R2Q0 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
Trim29Q8R2Q0 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC17.44■□□□□ 0.38
Trim29Q8R2Q0 Gm6089-201ENSMUST00000197666 938 ntBASIC17.44■□□□□ 0.38
Trim29Q8R2Q0 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC17.44■□□□□ 0.38
Trim29Q8R2Q0 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC17.44■□□□□ 0.38
Trim29Q8R2Q0 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim29Q8R2Q0 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Trim29Q8R2Q0 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC17.44■□□□□ 0.38
Trim29Q8R2Q0 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Trim29Q8R2Q0 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Trim29Q8R2Q0 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim29Q8R2Q0 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim29Q8R2Q0 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Trim29Q8R2Q0 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim29Q8R2Q0 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC17.44■□□□□ 0.38
Trim29Q8R2Q0 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim29Q8R2Q0 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim29Q8R2Q0 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Trim29Q8R2Q0 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Trim29Q8R2Q0 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Trim29Q8R2Q0 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim29Q8R2Q0 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC17.44■□□□□ 0.38
Trim29Q8R2Q0 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
Trim29Q8R2Q0 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim29Q8R2Q0 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Trim29Q8R2Q0 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC17.43■□□□□ 0.38
Trim29Q8R2Q0 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim29Q8R2Q0 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Trim29Q8R2Q0 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim29Q8R2Q0 Gm11839-201ENSMUST00000120647 1953 ntBASIC17.43■□□□□ 0.38
Trim29Q8R2Q0 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Trim29Q8R2Q0 Gm8318-201ENSMUST00000182954 872 ntBASIC17.43■□□□□ 0.38
Trim29Q8R2Q0 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim29Q8R2Q0 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim29Q8R2Q0 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim29Q8R2Q0 Gm38058-201ENSMUST00000194323 4368 ntBASIC17.43■□□□□ 0.38
Trim29Q8R2Q0 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim29Q8R2Q0 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Trim29Q8R2Q0 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Trim29Q8R2Q0 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim29Q8R2Q0 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim29Q8R2Q0 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim29Q8R2Q0 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC17.42■□□□□ 0.38
Trim29Q8R2Q0 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Trim29Q8R2Q0 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim29Q8R2Q0 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC17.42■□□□□ 0.38
Trim29Q8R2Q0 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Trim29Q8R2Q0 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
Trim29Q8R2Q0 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC17.42■□□□□ 0.38
Trim29Q8R2Q0 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim29Q8R2Q0 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim29Q8R2Q0 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim29Q8R2Q0 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim29Q8R2Q0 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC17.42■□□□□ 0.38
Trim29Q8R2Q0 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC17.42■□□□□ 0.38
Trim29Q8R2Q0 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim29Q8R2Q0 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim29Q8R2Q0 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim29Q8R2Q0 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
Trim29Q8R2Q0 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC17.41■□□□□ 0.38
Trim29Q8R2Q0 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim29Q8R2Q0 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim29Q8R2Q0 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim29Q8R2Q0 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Trim29Q8R2Q0 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim29Q8R2Q0 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC17.41■□□□□ 0.38
Trim29Q8R2Q0 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim29Q8R2Q0 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Trim29Q8R2Q0 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim29Q8R2Q0 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Trim29Q8R2Q0 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Trim29Q8R2Q0 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Trim29Q8R2Q0 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC17.41■□□□□ 0.38
Trim29Q8R2Q0 Gm7222-201ENSMUST00000117512 906 ntBASIC17.41■□□□□ 0.38
Trim29Q8R2Q0 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC17.41■□□□□ 0.38
Trim29Q8R2Q0 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Trim29Q8R2Q0 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Trim29Q8R2Q0 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC17.41■□□□□ 0.38
Trim29Q8R2Q0 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC17.41■□□□□ 0.38
Trim29Q8R2Q0 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Trim29Q8R2Q0 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim29Q8R2Q0 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Trim29Q8R2Q0 AC157650.3-201ENSMUST00000225058 1476 ntBASIC17.41■□□□□ 0.38
Trim29Q8R2Q0 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Trim29Q8R2Q0 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Trim29Q8R2Q0 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim29Q8R2Q0 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Trim29Q8R2Q0 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Trim29Q8R2Q0 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim29Q8R2Q0 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim29Q8R2Q0 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Trim29Q8R2Q0 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Trim29Q8R2Q0 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
Trim29Q8R2Q0 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim29Q8R2Q0 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Trim29Q8R2Q0 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim29Q8R2Q0 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim29Q8R2Q0 Gm2308-201ENSMUST00000166539 1004 ntBASIC17.4■□□□□ 0.38
Trim29Q8R2Q0 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms