Protein–RNA interactions for Protein: Q8R1F9

Rpp40, Ribonuclease P protein subunit p40, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp40Q8R1F9 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rpp40Q8R1F9 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rpp40Q8R1F9 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rpp40Q8R1F9 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rpp40Q8R1F9 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rpp40Q8R1F9 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
Rpp40Q8R1F9 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC16.3■□□□□ 0.2
Rpp40Q8R1F9 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Rpp40Q8R1F9 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC16.3■□□□□ 0.2
Rpp40Q8R1F9 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Rpp40Q8R1F9 Thap2-203ENSMUST00000218989 527 ntBASIC16.3■□□□□ 0.2
Rpp40Q8R1F9 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC16.3■□□□□ 0.2
Rpp40Q8R1F9 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rpp40Q8R1F9 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC16.3■□□□□ 0.2
Rpp40Q8R1F9 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rpp40Q8R1F9 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rpp40Q8R1F9 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC16.3■□□□□ 0.2
Rpp40Q8R1F9 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rpp40Q8R1F9 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Rpp40Q8R1F9 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC16.3■□□□□ 0.2
Rpp40Q8R1F9 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rpp40Q8R1F9 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rpp40Q8R1F9 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Rpp40Q8R1F9 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rpp40Q8R1F9 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
Rpp40Q8R1F9 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rpp40Q8R1F9 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rpp40Q8R1F9 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rpp40Q8R1F9 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rpp40Q8R1F9 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rpp40Q8R1F9 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rpp40Q8R1F9 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Rpp40Q8R1F9 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rpp40Q8R1F9 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC16.29■□□□□ 0.2
Rpp40Q8R1F9 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rpp40Q8R1F9 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rpp40Q8R1F9 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rpp40Q8R1F9 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rpp40Q8R1F9 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rpp40Q8R1F9 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rpp40Q8R1F9 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rpp40Q8R1F9 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rpp40Q8R1F9 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Rpp40Q8R1F9 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC16.29■□□□□ 0.2
Rpp40Q8R1F9 Gm37935-201ENSMUST00000192012 982 ntBASIC16.29■□□□□ 0.2
Rpp40Q8R1F9 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC16.29■□□□□ 0.2
Rpp40Q8R1F9 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rpp40Q8R1F9 CT943659.1-201ENSMUST00000215459 326 ntBASIC16.29■□□□□ 0.2
Rpp40Q8R1F9 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Rpp40Q8R1F9 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC16.29■□□□□ 0.2
Rpp40Q8R1F9 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC16.29■□□□□ 0.2
Rpp40Q8R1F9 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rpp40Q8R1F9 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rpp40Q8R1F9 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rpp40Q8R1F9 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rpp40Q8R1F9 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rpp40Q8R1F9 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rpp40Q8R1F9 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rpp40Q8R1F9 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rpp40Q8R1F9 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rpp40Q8R1F9 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC16.28■□□□□ 0.2
Rpp40Q8R1F9 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rpp40Q8R1F9 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rpp40Q8R1F9 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rpp40Q8R1F9 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Rpp40Q8R1F9 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rpp40Q8R1F9 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Rpp40Q8R1F9 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rpp40Q8R1F9 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rpp40Q8R1F9 Gm12892-201ENSMUST00000117367 1146 ntBASIC16.28■□□□□ 0.2
Rpp40Q8R1F9 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC16.28■□□□□ 0.2
Rpp40Q8R1F9 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Rpp40Q8R1F9 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rpp40Q8R1F9 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC16.28■□□□□ 0.2
Rpp40Q8R1F9 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rpp40Q8R1F9 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC16.28■□□□□ 0.2
Rpp40Q8R1F9 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rpp40Q8R1F9 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rpp40Q8R1F9 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rpp40Q8R1F9 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rpp40Q8R1F9 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rpp40Q8R1F9 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rpp40Q8R1F9 Asic1-205ENSMUST00000228185 1818 ntBASIC16.28■□□□□ 0.2
Rpp40Q8R1F9 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Rpp40Q8R1F9 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Rpp40Q8R1F9 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rpp40Q8R1F9 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rpp40Q8R1F9 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Rpp40Q8R1F9 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Rpp40Q8R1F9 Gm11839-201ENSMUST00000120647 1953 ntBASIC16.27■□□□□ 0.2
Rpp40Q8R1F9 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC16.27■□□□□ 0.2
Rpp40Q8R1F9 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rpp40Q8R1F9 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Rpp40Q8R1F9 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Rpp40Q8R1F9 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rpp40Q8R1F9 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rpp40Q8R1F9 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rpp40Q8R1F9 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Rpp40Q8R1F9 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC16.27■□□□□ 0.2
Rpp40Q8R1F9 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms