Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Clrn1Q8K445 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Clrn1Q8K445 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC14.41□□□□□ -0.1
Clrn1Q8K445 Gm11185-201ENSMUST00000117732 1007 ntBASIC14.41□□□□□ -0.1
Clrn1Q8K445 Gm2308-201ENSMUST00000166539 1004 ntBASIC14.41□□□□□ -0.1
Clrn1Q8K445 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Clrn1Q8K445 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Clrn1Q8K445 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC14.41□□□□□ -0.1
Clrn1Q8K445 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Clrn1Q8K445 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Clrn1Q8K445 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Clrn1Q8K445 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Clrn1Q8K445 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Clrn1Q8K445 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Clrn1Q8K445 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Clrn1Q8K445 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Clrn1Q8K445 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
Clrn1Q8K445 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Clrn1Q8K445 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Clrn1Q8K445 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Clrn1Q8K445 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Clrn1Q8K445 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Clrn1Q8K445 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Clrn1Q8K445 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC14.4□□□□□ -0.1
Clrn1Q8K445 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC14.4□□□□□ -0.1
Clrn1Q8K445 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC14.4□□□□□ -0.1
Clrn1Q8K445 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Clrn1Q8K445 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC14.4□□□□□ -0.1
Clrn1Q8K445 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Clrn1Q8K445 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Clrn1Q8K445 Gm6550-201ENSMUST00000187574 993 ntBASIC14.4□□□□□ -0.1
Clrn1Q8K445 Gm10060-201ENSMUST00000212002 111 ntBASIC14.4□□□□□ -0.1
Clrn1Q8K445 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Clrn1Q8K445 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Clrn1Q8K445 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC14.4□□□□□ -0.1
Clrn1Q8K445 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Clrn1Q8K445 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Clrn1Q8K445 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Clrn1Q8K445 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Clrn1Q8K445 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Clrn1Q8K445 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC14.4□□□□□ -0.1
Clrn1Q8K445 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC14.4□□□□□ -0.1
Clrn1Q8K445 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Clrn1Q8K445 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Clrn1Q8K445 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Clrn1Q8K445 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Clrn1Q8K445 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Clrn1Q8K445 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Clrn1Q8K445 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Clrn1Q8K445 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC14.39□□□□□ -0.11
Clrn1Q8K445 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Clrn1Q8K445 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Clrn1Q8K445 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC14.39□□□□□ -0.11
Clrn1Q8K445 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Clrn1Q8K445 Gm8318-201ENSMUST00000182954 872 ntBASIC14.39□□□□□ -0.11
Clrn1Q8K445 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Clrn1Q8K445 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC14.39□□□□□ -0.11
Clrn1Q8K445 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Clrn1Q8K445 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC14.39□□□□□ -0.11
Clrn1Q8K445 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Clrn1Q8K445 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Clrn1Q8K445 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Clrn1Q8K445 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Clrn1Q8K445 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Clrn1Q8K445 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Clrn1Q8K445 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC14.39□□□□□ -0.11
Clrn1Q8K445 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Clrn1Q8K445 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Clrn1Q8K445 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Clrn1Q8K445 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Clrn1Q8K445 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Clrn1Q8K445 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Clrn1Q8K445 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Clrn1Q8K445 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Clrn1Q8K445 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC14.38□□□□□ -0.11
Clrn1Q8K445 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Clrn1Q8K445 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Clrn1Q8K445 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Clrn1Q8K445 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Clrn1Q8K445 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Clrn1Q8K445 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Clrn1Q8K445 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC14.38□□□□□ -0.11
Clrn1Q8K445 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Clrn1Q8K445 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC14.38□□□□□ -0.11
Clrn1Q8K445 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Clrn1Q8K445 Gm37153-201ENSMUST00000193637 231 ntBASIC14.38□□□□□ -0.11
Clrn1Q8K445 Gm18195-201ENSMUST00000207604 706 ntBASIC14.38□□□□□ -0.11
Clrn1Q8K445 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
Clrn1Q8K445 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Clrn1Q8K445 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC14.38□□□□□ -0.11
Clrn1Q8K445 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Clrn1Q8K445 Gm7461-201ENSMUST00000058918 827 ntBASIC14.38□□□□□ -0.11
Clrn1Q8K445 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Clrn1Q8K445 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC14.38□□□□□ -0.11
Clrn1Q8K445 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Clrn1Q8K445 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Clrn1Q8K445 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC14.38□□□□□ -0.11
Clrn1Q8K445 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Clrn1Q8K445 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Clrn1Q8K445 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms