Protein–RNA interactions for Protein: Q8K0T0

Rtn1, Reticulon-1, mousemouse

Predictions only

Length 780 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn1Q8K0T0 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC17.59■□□□□ 0.41
Rtn1Q8K0T0 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Rtn1Q8K0T0 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rtn1Q8K0T0 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC17.59■□□□□ 0.41
Rtn1Q8K0T0 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Rtn1Q8K0T0 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC17.59■□□□□ 0.41
Rtn1Q8K0T0 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rtn1Q8K0T0 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rtn1Q8K0T0 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC17.59■□□□□ 0.41
Rtn1Q8K0T0 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rtn1Q8K0T0 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC17.58■□□□□ 0.41
Rtn1Q8K0T0 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Rtn1Q8K0T0 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Rtn1Q8K0T0 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Rtn1Q8K0T0 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Rtn1Q8K0T0 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Rtn1Q8K0T0 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Rtn1Q8K0T0 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rtn1Q8K0T0 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rtn1Q8K0T0 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC17.58■□□□□ 0.4
Rtn1Q8K0T0 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC17.58■□□□□ 0.4
Rtn1Q8K0T0 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Rtn1Q8K0T0 AC084391.1-201ENSMUST00000200651 141 ntBASIC17.58■□□□□ 0.4
Rtn1Q8K0T0 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Rtn1Q8K0T0 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Rtn1Q8K0T0 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC17.58■□□□□ 0.4
Rtn1Q8K0T0 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC17.58■□□□□ 0.4
Rtn1Q8K0T0 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rtn1Q8K0T0 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rtn1Q8K0T0 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rtn1Q8K0T0 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rtn1Q8K0T0 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC17.58■□□□□ 0.4
Rtn1Q8K0T0 Gm43352-201ENSMUST00000196419 3065 ntBASIC17.58■□□□□ 0.4
Rtn1Q8K0T0 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Rtn1Q8K0T0 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rtn1Q8K0T0 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Rtn1Q8K0T0 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rtn1Q8K0T0 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rtn1Q8K0T0 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rtn1Q8K0T0 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rtn1Q8K0T0 AC131709.1-201ENSMUST00000224731 1180 ntBASIC17.57■□□□□ 0.4
Rtn1Q8K0T0 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rtn1Q8K0T0 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rtn1Q8K0T0 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rtn1Q8K0T0 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rtn1Q8K0T0 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rtn1Q8K0T0 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rtn1Q8K0T0 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rtn1Q8K0T0 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rtn1Q8K0T0 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Rtn1Q8K0T0 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Rtn1Q8K0T0 Gm8242-201ENSMUST00000193029 1420 ntBASIC17.56■□□□□ 0.4
Rtn1Q8K0T0 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC17.56■□□□□ 0.4
Rtn1Q8K0T0 Ptprs-211ENSMUST00000223859 5588 ntBASIC17.56■□□□□ 0.4
Rtn1Q8K0T0 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rtn1Q8K0T0 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rtn1Q8K0T0 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Rtn1Q8K0T0 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rtn1Q8K0T0 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC17.56■□□□□ 0.4
Rtn1Q8K0T0 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC17.56■□□□□ 0.4
Rtn1Q8K0T0 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC17.56■□□□□ 0.4
Rtn1Q8K0T0 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC17.56■□□□□ 0.4
Rtn1Q8K0T0 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC17.56■□□□□ 0.4
Rtn1Q8K0T0 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC17.56■□□□□ 0.4
Rtn1Q8K0T0 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rtn1Q8K0T0 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rtn1Q8K0T0 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rtn1Q8K0T0 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rtn1Q8K0T0 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rtn1Q8K0T0 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rtn1Q8K0T0 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rtn1Q8K0T0 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Rtn1Q8K0T0 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rtn1Q8K0T0 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rtn1Q8K0T0 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Rtn1Q8K0T0 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Rtn1Q8K0T0 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC17.56■□□□□ 0.4
Rtn1Q8K0T0 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rtn1Q8K0T0 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Rtn1Q8K0T0 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Rtn1Q8K0T0 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rtn1Q8K0T0 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rtn1Q8K0T0 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Rtn1Q8K0T0 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC17.55■□□□□ 0.4
Rtn1Q8K0T0 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Rtn1Q8K0T0 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rtn1Q8K0T0 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Rtn1Q8K0T0 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Rtn1Q8K0T0 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rtn1Q8K0T0 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rtn1Q8K0T0 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC17.55■□□□□ 0.4
Rtn1Q8K0T0 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Rtn1Q8K0T0 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rtn1Q8K0T0 Gm18246-201ENSMUST00000221023 728 ntBASIC17.55■□□□□ 0.4
Rtn1Q8K0T0 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rtn1Q8K0T0 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rtn1Q8K0T0 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rtn1Q8K0T0 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rtn1Q8K0T0 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Rtn1Q8K0T0 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms