Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC14.36□□□□□ -0.11
Rfwd3Q8CIK8 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Rfwd3Q8CIK8 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC14.36□□□□□ -0.11
Rfwd3Q8CIK8 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC14.36□□□□□ -0.11
Rfwd3Q8CIK8 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rfwd3Q8CIK8 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Rfwd3Q8CIK8 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rfwd3Q8CIK8 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rfwd3Q8CIK8 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Rfwd3Q8CIK8 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rfwd3Q8CIK8 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC14.36□□□□□ -0.11
Rfwd3Q8CIK8 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rfwd3Q8CIK8 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rfwd3Q8CIK8 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Rfwd3Q8CIK8 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Rfwd3Q8CIK8 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rfwd3Q8CIK8 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rfwd3Q8CIK8 Gm27528-202ENSMUST00000222916 2012 ntBASIC14.36□□□□□ -0.11
Rfwd3Q8CIK8 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Rfwd3Q8CIK8 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rfwd3Q8CIK8 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rfwd3Q8CIK8 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rfwd3Q8CIK8 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rfwd3Q8CIK8 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rfwd3Q8CIK8 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Rfwd3Q8CIK8 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Rfwd3Q8CIK8 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rfwd3Q8CIK8 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rfwd3Q8CIK8 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rfwd3Q8CIK8 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
Rfwd3Q8CIK8 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rfwd3Q8CIK8 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
Rfwd3Q8CIK8 Gm11764-201ENSMUST00000120221 623 ntBASIC14.35□□□□□ -0.11
Rfwd3Q8CIK8 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC14.35□□□□□ -0.11
Rfwd3Q8CIK8 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC14.35□□□□□ -0.11
Rfwd3Q8CIK8 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC14.35□□□□□ -0.11
Rfwd3Q8CIK8 AC133598.3-202ENSMUST00000224219 531 ntBASIC14.35□□□□□ -0.11
Rfwd3Q8CIK8 AC159093.1-201ENSMUST00000227779 380 ntBASIC14.35□□□□□ -0.11
Rfwd3Q8CIK8 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rfwd3Q8CIK8 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rfwd3Q8CIK8 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rfwd3Q8CIK8 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rfwd3Q8CIK8 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC14.35□□□□□ -0.11
Rfwd3Q8CIK8 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rfwd3Q8CIK8 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rfwd3Q8CIK8 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC14.35□□□□□ -0.11
Rfwd3Q8CIK8 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rfwd3Q8CIK8 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rfwd3Q8CIK8 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Rfwd3Q8CIK8 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rfwd3Q8CIK8 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Rfwd3Q8CIK8 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rfwd3Q8CIK8 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Rfwd3Q8CIK8 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC14.35□□□□□ -0.11
Rfwd3Q8CIK8 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rfwd3Q8CIK8 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Rfwd3Q8CIK8 Prob1-201ENSMUST00000097619 3021 ntBASIC14.34□□□□□ -0.11
Rfwd3Q8CIK8 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rfwd3Q8CIK8 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Rfwd3Q8CIK8 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rfwd3Q8CIK8 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Rfwd3Q8CIK8 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rfwd3Q8CIK8 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Rfwd3Q8CIK8 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Rfwd3Q8CIK8 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rfwd3Q8CIK8 Gm7286-201ENSMUST00000182691 1007 ntBASIC14.34□□□□□ -0.11
Rfwd3Q8CIK8 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC14.34□□□□□ -0.11
Rfwd3Q8CIK8 AV026068-213ENSMUST00000223675 1171 ntBASIC14.34□□□□□ -0.11
Rfwd3Q8CIK8 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rfwd3Q8CIK8 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rfwd3Q8CIK8 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Rfwd3Q8CIK8 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rfwd3Q8CIK8 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rfwd3Q8CIK8 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rfwd3Q8CIK8 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rfwd3Q8CIK8 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rfwd3Q8CIK8 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Rfwd3Q8CIK8 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rfwd3Q8CIK8 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Rfwd3Q8CIK8 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Rfwd3Q8CIK8 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rfwd3Q8CIK8 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rfwd3Q8CIK8 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Rfwd3Q8CIK8 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
Rfwd3Q8CIK8 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
Rfwd3Q8CIK8 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Rfwd3Q8CIK8 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Rfwd3Q8CIK8 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Rfwd3Q8CIK8 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rfwd3Q8CIK8 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rfwd3Q8CIK8 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rfwd3Q8CIK8 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC14.33□□□□□ -0.12
Rfwd3Q8CIK8 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Rfwd3Q8CIK8 Gm5682-201ENSMUST00000173402 505 ntBASIC14.33□□□□□ -0.12
Rfwd3Q8CIK8 Gm18733-201ENSMUST00000173950 856 ntBASIC14.33□□□□□ -0.12
Rfwd3Q8CIK8 Mir5131-201ENSMUST00000175426 93 ntBASIC14.33□□□□□ -0.12
Rfwd3Q8CIK8 AC122024.2-201ENSMUST00000220086 871 ntBASIC14.33□□□□□ -0.12
Rfwd3Q8CIK8 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC14.33□□□□□ -0.12
Rfwd3Q8CIK8 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rfwd3Q8CIK8 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms