Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 AC124569.2-201ENSMUST00000225998 818 ntBASIC18.88■□□□□ 0.61
Smc5Q8CG46 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Smc5Q8CG46 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Smc5Q8CG46 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Smc5Q8CG46 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Smc5Q8CG46 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Smc5Q8CG46 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Smc5Q8CG46 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC18.88■□□□□ 0.61
Smc5Q8CG46 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Smc5Q8CG46 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Smc5Q8CG46 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Smc5Q8CG46 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Smc5Q8CG46 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Smc5Q8CG46 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Smc5Q8CG46 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Smc5Q8CG46 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Smc5Q8CG46 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Smc5Q8CG46 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Smc5Q8CG46 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Smc5Q8CG46 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Smc5Q8CG46 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Smc5Q8CG46 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
Smc5Q8CG46 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC18.87■□□□□ 0.61
Smc5Q8CG46 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Smc5Q8CG46 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Smc5Q8CG46 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Smc5Q8CG46 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Smc5Q8CG46 AC167013.2-201ENSMUST00000228520 2684 ntBASIC18.87■□□□□ 0.61
Smc5Q8CG46 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Smc5Q8CG46 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Smc5Q8CG46 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Smc5Q8CG46 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Smc5Q8CG46 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Smc5Q8CG46 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC18.87■□□□□ 0.61
Smc5Q8CG46 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Smc5Q8CG46 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Smc5Q8CG46 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Smc5Q8CG46 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC18.86■□□□□ 0.61
Smc5Q8CG46 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
Smc5Q8CG46 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smc5Q8CG46 AC162938.1-201ENSMUST00000213140 2323 ntBASIC18.86■□□□□ 0.61
Smc5Q8CG46 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smc5Q8CG46 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Smc5Q8CG46 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Smc5Q8CG46 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smc5Q8CG46 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smc5Q8CG46 AC157650.3-201ENSMUST00000225058 1476 ntBASIC18.86■□□□□ 0.61
Smc5Q8CG46 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smc5Q8CG46 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Smc5Q8CG46 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smc5Q8CG46 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Smc5Q8CG46 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC18.86■□□□□ 0.61
Smc5Q8CG46 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smc5Q8CG46 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smc5Q8CG46 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smc5Q8CG46 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Smc5Q8CG46 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Smc5Q8CG46 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Smc5Q8CG46 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smc5Q8CG46 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smc5Q8CG46 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smc5Q8CG46 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Smc5Q8CG46 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smc5Q8CG46 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smc5Q8CG46 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Smc5Q8CG46 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smc5Q8CG46 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Smc5Q8CG46 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smc5Q8CG46 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC18.85■□□□□ 0.61
Smc5Q8CG46 Gm27357-201ENSMUST00000183754 135 ntBASIC18.85■□□□□ 0.61
Smc5Q8CG46 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smc5Q8CG46 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smc5Q8CG46 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
Smc5Q8CG46 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Smc5Q8CG46 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smc5Q8CG46 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smc5Q8CG46 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Smc5Q8CG46 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smc5Q8CG46 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smc5Q8CG46 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smc5Q8CG46 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smc5Q8CG46 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Smc5Q8CG46 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Smc5Q8CG46 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smc5Q8CG46 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smc5Q8CG46 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smc5Q8CG46 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Smc5Q8CG46 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC18.84■□□□□ 0.61
Smc5Q8CG46 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Smc5Q8CG46 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Smc5Q8CG46 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Smc5Q8CG46 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smc5Q8CG46 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Smc5Q8CG46 Gm8097-201ENSMUST00000117903 829 ntBASIC18.84■□□□□ 0.61
Smc5Q8CG46 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC18.84■□□□□ 0.61
Smc5Q8CG46 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC18.84■□□□□ 0.61
Smc5Q8CG46 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Smc5Q8CG46 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC18.84■□□□□ 0.61
Smc5Q8CG46 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smc5Q8CG46 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms