Protein–RNA interactions for Protein: Q8C196

Cps1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, mousemouse

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cps1Q8C196 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cps1Q8C196 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC20.26■□□□□ 0.83
Cps1Q8C196 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cps1Q8C196 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cps1Q8C196 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cps1Q8C196 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cps1Q8C196 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Cps1Q8C196 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC20.26■□□□□ 0.83
Cps1Q8C196 Gm45384-201ENSMUST00000210451 277 ntBASIC20.26■□□□□ 0.83
Cps1Q8C196 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cps1Q8C196 Gm15823-201ENSMUST00000064305 670 ntBASIC20.26■□□□□ 0.83
Cps1Q8C196 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cps1Q8C196 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC20.26■□□□□ 0.83
Cps1Q8C196 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cps1Q8C196 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cps1Q8C196 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cps1Q8C196 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Cps1Q8C196 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Cps1Q8C196 Olfr286-202ENSMUST00000205305 969 ntBASIC20.25■□□□□ 0.83
Cps1Q8C196 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cps1Q8C196 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cps1Q8C196 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cps1Q8C196 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Cps1Q8C196 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cps1Q8C196 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cps1Q8C196 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cps1Q8C196 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cps1Q8C196 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cps1Q8C196 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cps1Q8C196 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC20.24■□□□□ 0.83
Cps1Q8C196 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Cps1Q8C196 Gm7390-201ENSMUST00000212452 1216 ntBASIC20.24■□□□□ 0.83
Cps1Q8C196 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Cps1Q8C196 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Cps1Q8C196 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cps1Q8C196 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cps1Q8C196 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cps1Q8C196 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cps1Q8C196 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Cps1Q8C196 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cps1Q8C196 Gm6944-201ENSMUST00000182449 1006 ntBASIC20.23■□□□□ 0.83
Cps1Q8C196 Gm44719-201ENSMUST00000206404 149 ntBASIC20.23■□□□□ 0.83
Cps1Q8C196 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cps1Q8C196 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Cps1Q8C196 Gm25857-201ENSMUST00000082788 129 ntBASIC20.23■□□□□ 0.83
Cps1Q8C196 Mir125a-201ENSMUST00000083545 68 ntBASIC20.23■□□□□ 0.83
Cps1Q8C196 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cps1Q8C196 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Cps1Q8C196 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Cps1Q8C196 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cps1Q8C196 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Cps1Q8C196 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cps1Q8C196 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cps1Q8C196 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cps1Q8C196 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Cps1Q8C196 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cps1Q8C196 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Cps1Q8C196 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cps1Q8C196 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cps1Q8C196 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cps1Q8C196 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cps1Q8C196 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cps1Q8C196 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC20.22■□□□□ 0.83
Cps1Q8C196 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Cps1Q8C196 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC20.22■□□□□ 0.83
Cps1Q8C196 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cps1Q8C196 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cps1Q8C196 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Cps1Q8C196 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cps1Q8C196 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cps1Q8C196 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Cps1Q8C196 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cps1Q8C196 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cps1Q8C196 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cps1Q8C196 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cps1Q8C196 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cps1Q8C196 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC20.22■□□□□ 0.83
Cps1Q8C196 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC20.22■□□□□ 0.83
Cps1Q8C196 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cps1Q8C196 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Cps1Q8C196 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Cps1Q8C196 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cps1Q8C196 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cps1Q8C196 Gm12091-201ENSMUST00000146791 830 ntBASIC20.22■□□□□ 0.83
Cps1Q8C196 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC20.22■□□□□ 0.83
Cps1Q8C196 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Cps1Q8C196 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC20.21■□□□□ 0.83
Cps1Q8C196 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cps1Q8C196 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Cps1Q8C196 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cps1Q8C196 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cps1Q8C196 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cps1Q8C196 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cps1Q8C196 Gm45412-201ENSMUST00000210217 2275 ntBASIC20.21■□□□□ 0.83
Cps1Q8C196 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Cps1Q8C196 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
Cps1Q8C196 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC20.21■□□□□ 0.83
Cps1Q8C196 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Cps1Q8C196 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC20.21■□□□□ 0.83
Cps1Q8C196 Gm37917-201ENSMUST00000194711 392 ntBASIC20.21■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms