Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC15.73■□□□□ 0.11
Trub1Q8C0D0 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trub1Q8C0D0 Gm13884-201ENSMUST00000118103 829 ntBASIC15.73■□□□□ 0.11
Trub1Q8C0D0 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trub1Q8C0D0 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC15.73■□□□□ 0.11
Trub1Q8C0D0 AC161829.1-201ENSMUST00000220298 281 ntBASIC15.73■□□□□ 0.11
Trub1Q8C0D0 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trub1Q8C0D0 AC147366.1-201ENSMUST00000227671 852 ntBASIC15.73■□□□□ 0.11
Trub1Q8C0D0 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trub1Q8C0D0 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trub1Q8C0D0 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Trub1Q8C0D0 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC15.73■□□□□ 0.11
Trub1Q8C0D0 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trub1Q8C0D0 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trub1Q8C0D0 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
Trub1Q8C0D0 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trub1Q8C0D0 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trub1Q8C0D0 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Trub1Q8C0D0 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC15.72■□□□□ 0.11
Trub1Q8C0D0 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trub1Q8C0D0 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trub1Q8C0D0 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trub1Q8C0D0 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trub1Q8C0D0 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trub1Q8C0D0 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trub1Q8C0D0 Gm5184-201ENSMUST00000220417 1702 ntBASIC15.72■□□□□ 0.11
Trub1Q8C0D0 Celf4-206ENSMUST00000224553 1729 ntBASIC15.72■□□□□ 0.11
Trub1Q8C0D0 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Trub1Q8C0D0 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trub1Q8C0D0 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trub1Q8C0D0 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Trub1Q8C0D0 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trub1Q8C0D0 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
Trub1Q8C0D0 Gm11764-201ENSMUST00000120221 623 ntBASIC15.72■□□□□ 0.11
Trub1Q8C0D0 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trub1Q8C0D0 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trub1Q8C0D0 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Trub1Q8C0D0 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trub1Q8C0D0 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC15.72■□□□□ 0.11
Trub1Q8C0D0 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trub1Q8C0D0 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC15.72■□□□□ 0.11
Trub1Q8C0D0 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC15.72■□□□□ 0.11
Trub1Q8C0D0 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trub1Q8C0D0 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trub1Q8C0D0 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trub1Q8C0D0 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trub1Q8C0D0 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Trub1Q8C0D0 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
Trub1Q8C0D0 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trub1Q8C0D0 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trub1Q8C0D0 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trub1Q8C0D0 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trub1Q8C0D0 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC15.72■□□□□ 0.11
Trub1Q8C0D0 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trub1Q8C0D0 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Trub1Q8C0D0 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trub1Q8C0D0 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Trub1Q8C0D0 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Trub1Q8C0D0 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trub1Q8C0D0 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trub1Q8C0D0 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Trub1Q8C0D0 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trub1Q8C0D0 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trub1Q8C0D0 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trub1Q8C0D0 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC15.71■□□□□ 0.11
Trub1Q8C0D0 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trub1Q8C0D0 Gm28659-201ENSMUST00000188013 759 ntBASIC15.71■□□□□ 0.11
Trub1Q8C0D0 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC15.71■□□□□ 0.11
Trub1Q8C0D0 Gm10060-201ENSMUST00000212002 111 ntBASIC15.71■□□□□ 0.11
Trub1Q8C0D0 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC15.71■□□□□ 0.11
Trub1Q8C0D0 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trub1Q8C0D0 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trub1Q8C0D0 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trub1Q8C0D0 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trub1Q8C0D0 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC15.71■□□□□ 0.11
Trub1Q8C0D0 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Trub1Q8C0D0 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
Trub1Q8C0D0 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Trub1Q8C0D0 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Trub1Q8C0D0 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trub1Q8C0D0 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trub1Q8C0D0 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trub1Q8C0D0 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trub1Q8C0D0 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Trub1Q8C0D0 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trub1Q8C0D0 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trub1Q8C0D0 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trub1Q8C0D0 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trub1Q8C0D0 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
Trub1Q8C0D0 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trub1Q8C0D0 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trub1Q8C0D0 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC15.7■□□□□ 0.1
Trub1Q8C0D0 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trub1Q8C0D0 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC15.7■□□□□ 0.1
Trub1Q8C0D0 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trub1Q8C0D0 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Trub1Q8C0D0 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trub1Q8C0D0 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Trub1Q8C0D0 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trub1Q8C0D0 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms