Protein–RNA interactions for Protein: Q8BYH8

Chd9, Chromodomain-helicase-DNA-binding protein 9, mousemouse

Predictions only

Length 2,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd9Q8BYH8 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Chd9Q8BYH8 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Chd9Q8BYH8 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC11.93□□□□□ -0.5
Chd9Q8BYH8 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Chd9Q8BYH8 Gm20445-201ENSMUST00000061905 565 ntBASIC11.93□□□□□ -0.5
Chd9Q8BYH8 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Chd9Q8BYH8 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Chd9Q8BYH8 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Chd9Q8BYH8 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Chd9Q8BYH8 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Chd9Q8BYH8 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Chd9Q8BYH8 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC11.92□□□□□ -0.5
Chd9Q8BYH8 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Chd9Q8BYH8 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Chd9Q8BYH8 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Chd9Q8BYH8 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Chd9Q8BYH8 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Chd9Q8BYH8 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Chd9Q8BYH8 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Chd9Q8BYH8 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC11.92□□□□□ -0.5
Chd9Q8BYH8 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC11.92□□□□□ -0.5
Chd9Q8BYH8 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC11.92□□□□□ -0.5
Chd9Q8BYH8 Gm18916-201ENSMUST00000198264 1246 ntBASIC11.92□□□□□ -0.5
Chd9Q8BYH8 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC11.92□□□□□ -0.5
Chd9Q8BYH8 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Chd9Q8BYH8 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Chd9Q8BYH8 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Chd9Q8BYH8 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Chd9Q8BYH8 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Chd9Q8BYH8 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Chd9Q8BYH8 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Chd9Q8BYH8 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Chd9Q8BYH8 Gm42901-201ENSMUST00000197735 3171 ntBASIC11.92□□□□□ -0.5
Chd9Q8BYH8 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Chd9Q8BYH8 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Chd9Q8BYH8 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Chd9Q8BYH8 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Chd9Q8BYH8 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Chd9Q8BYH8 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Chd9Q8BYH8 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Chd9Q8BYH8 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Chd9Q8BYH8 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Chd9Q8BYH8 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Chd9Q8BYH8 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC11.91□□□□□ -0.5
Chd9Q8BYH8 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC11.91□□□□□ -0.5
Chd9Q8BYH8 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Chd9Q8BYH8 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC11.91□□□□□ -0.5
Chd9Q8BYH8 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Chd9Q8BYH8 Gm45195-201ENSMUST00000205597 1008 ntBASIC11.91□□□□□ -0.5
Chd9Q8BYH8 AC132317.1-201ENSMUST00000227227 962 ntBASIC11.91□□□□□ -0.5
Chd9Q8BYH8 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC11.91□□□□□ -0.5
Chd9Q8BYH8 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Chd9Q8BYH8 Gm18222-201ENSMUST00000202416 1387 ntBASIC11.91□□□□□ -0.5
Chd9Q8BYH8 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC11.91□□□□□ -0.5
Chd9Q8BYH8 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Chd9Q8BYH8 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Chd9Q8BYH8 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Chd9Q8BYH8 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC11.91□□□□□ -0.5
Chd9Q8BYH8 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Chd9Q8BYH8 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Chd9Q8BYH8 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC11.91□□□□□ -0.5
Chd9Q8BYH8 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC11.91□□□□□ -0.5
Chd9Q8BYH8 AC238811.1-201ENSMUST00000225302 441 ntBASIC11.91□□□□□ -0.5
Chd9Q8BYH8 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC11.91□□□□□ -0.5
Chd9Q8BYH8 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC11.91□□□□□ -0.5
Chd9Q8BYH8 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC11.91□□□□□ -0.5
Chd9Q8BYH8 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Chd9Q8BYH8 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC11.9□□□□□ -0.5
Chd9Q8BYH8 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC11.9□□□□□ -0.5
Chd9Q8BYH8 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC11.9□□□□□ -0.5
Chd9Q8BYH8 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Chd9Q8BYH8 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Chd9Q8BYH8 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Chd9Q8BYH8 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC11.9□□□□□ -0.5
Chd9Q8BYH8 Gm14723-201ENSMUST00000118686 215 ntBASIC11.9□□□□□ -0.5
Chd9Q8BYH8 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Chd9Q8BYH8 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Chd9Q8BYH8 Gm7584-201ENSMUST00000175829 940 ntBASIC11.9□□□□□ -0.5
Chd9Q8BYH8 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC11.9□□□□□ -0.5
Chd9Q8BYH8 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Chd9Q8BYH8 Gm43289-201ENSMUST00000200537 1475 ntBASIC11.9□□□□□ -0.5
Chd9Q8BYH8 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Chd9Q8BYH8 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
Chd9Q8BYH8 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC11.9□□□□□ -0.5
Chd9Q8BYH8 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Chd9Q8BYH8 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Chd9Q8BYH8 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC11.9□□□□□ -0.5
Chd9Q8BYH8 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Chd9Q8BYH8 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Chd9Q8BYH8 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Chd9Q8BYH8 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Chd9Q8BYH8 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Chd9Q8BYH8 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC11.9□□□□□ -0.5
Chd9Q8BYH8 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC11.9□□□□□ -0.5
Chd9Q8BYH8 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Chd9Q8BYH8 Gm29199-201ENSMUST00000187766 775 ntBASIC11.9□□□□□ -0.5
Chd9Q8BYH8 Gm4857-201ENSMUST00000192718 785 ntBASIC11.9□□□□□ -0.5
Chd9Q8BYH8 Gm44799-201ENSMUST00000207639 1202 ntBASIC11.9□□□□□ -0.5
Chd9Q8BYH8 Gm18049-201ENSMUST00000208909 581 ntBASIC11.9□□□□□ -0.5
Chd9Q8BYH8 AC155637.1-201ENSMUST00000218560 636 ntBASIC11.9□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms