Protein–RNA interactions for Protein: Q8BXJ2

Trerf1, Transcriptional-regulating factor 1, mousemouse

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trerf1Q8BXJ2 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Trerf1Q8BXJ2 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trerf1Q8BXJ2 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Trerf1Q8BXJ2 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trerf1Q8BXJ2 Gm13830-205ENSMUST00000201195 1155 ntBASIC16.1■□□□□ 0.17
Trerf1Q8BXJ2 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC16.1■□□□□ 0.17
Trerf1Q8BXJ2 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trerf1Q8BXJ2 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trerf1Q8BXJ2 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Trerf1Q8BXJ2 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trerf1Q8BXJ2 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trerf1Q8BXJ2 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Trerf1Q8BXJ2 Gm37019-201ENSMUST00000192133 2134 ntBASIC16.1■□□□□ 0.17
Trerf1Q8BXJ2 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trerf1Q8BXJ2 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trerf1Q8BXJ2 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Trerf1Q8BXJ2 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trerf1Q8BXJ2 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Trerf1Q8BXJ2 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trerf1Q8BXJ2 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Trerf1Q8BXJ2 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trerf1Q8BXJ2 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trerf1Q8BXJ2 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trerf1Q8BXJ2 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC16.09■□□□□ 0.17
Trerf1Q8BXJ2 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trerf1Q8BXJ2 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trerf1Q8BXJ2 Gm4609-201ENSMUST00000106443 1002 ntBASIC16.09■□□□□ 0.17
Trerf1Q8BXJ2 Gm5138-201ENSMUST00000113842 1002 ntBASIC16.09■□□□□ 0.17
Trerf1Q8BXJ2 Gm15191-201ENSMUST00000117933 1000 ntBASIC16.09■□□□□ 0.17
Trerf1Q8BXJ2 Gm12182-201ENSMUST00000118655 1008 ntBASIC16.09■□□□□ 0.17
Trerf1Q8BXJ2 Gm4459-201ENSMUST00000118750 468 ntBASIC16.09■□□□□ 0.17
Trerf1Q8BXJ2 Gm13882-201ENSMUST00000120886 1002 ntBASIC16.09■□□□□ 0.17
Trerf1Q8BXJ2 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC16.09■□□□□ 0.17
Trerf1Q8BXJ2 Gm10284-201ENSMUST00000145057 1005 ntBASIC16.09■□□□□ 0.17
Trerf1Q8BXJ2 Gm10481-201ENSMUST00000179228 1002 ntBASIC16.09■□□□□ 0.17
Trerf1Q8BXJ2 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC16.09■□□□□ 0.17
Trerf1Q8BXJ2 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Trerf1Q8BXJ2 Gm2574-201ENSMUST00000181051 1002 ntBASIC16.09■□□□□ 0.17
Trerf1Q8BXJ2 Gm3200-201ENSMUST00000181493 1002 ntBASIC16.09■□□□□ 0.17
Trerf1Q8BXJ2 Gm8825-201ENSMUST00000182565 998 ntBASIC16.09■□□□□ 0.17
Trerf1Q8BXJ2 Gm4518-201ENSMUST00000182638 718 ntBASIC16.09■□□□□ 0.17
Trerf1Q8BXJ2 Gm8330-201ENSMUST00000182754 1008 ntBASIC16.09■□□□□ 0.17
Trerf1Q8BXJ2 Gm4575-201ENSMUST00000182991 1002 ntBASIC16.09■□□□□ 0.17
Trerf1Q8BXJ2 Gm8709-201ENSMUST00000183230 1012 ntBASIC16.09■□□□□ 0.17
Trerf1Q8BXJ2 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC16.09■□□□□ 0.17
Trerf1Q8BXJ2 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trerf1Q8BXJ2 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Trerf1Q8BXJ2 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trerf1Q8BXJ2 Gm10293-201ENSMUST00000076317 1002 ntBASIC16.09■□□□□ 0.17
Trerf1Q8BXJ2 Gm6316-201ENSMUST00000082064 1020 ntBASIC16.09■□□□□ 0.17
Trerf1Q8BXJ2 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trerf1Q8BXJ2 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trerf1Q8BXJ2 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trerf1Q8BXJ2 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trerf1Q8BXJ2 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trerf1Q8BXJ2 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trerf1Q8BXJ2 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trerf1Q8BXJ2 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trerf1Q8BXJ2 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trerf1Q8BXJ2 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trerf1Q8BXJ2 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trerf1Q8BXJ2 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trerf1Q8BXJ2 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trerf1Q8BXJ2 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC16.09■□□□□ 0.17
Trerf1Q8BXJ2 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Trerf1Q8BXJ2 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Trerf1Q8BXJ2 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC16.08■□□□□ 0.17
Trerf1Q8BXJ2 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Trerf1Q8BXJ2 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Trerf1Q8BXJ2 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC16.08■□□□□ 0.16
Trerf1Q8BXJ2 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
Trerf1Q8BXJ2 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Trerf1Q8BXJ2 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC16.08■□□□□ 0.16
Trerf1Q8BXJ2 AC133598.3-202ENSMUST00000224219 531 ntBASIC16.08■□□□□ 0.16
Trerf1Q8BXJ2 Rps4l-201ENSMUST00000071745 943 ntBASIC16.08■□□□□ 0.16
Trerf1Q8BXJ2 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trerf1Q8BXJ2 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trerf1Q8BXJ2 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trerf1Q8BXJ2 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Trerf1Q8BXJ2 Gm38327-201ENSMUST00000195852 1755 ntBASIC16.08■□□□□ 0.16
Trerf1Q8BXJ2 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trerf1Q8BXJ2 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trerf1Q8BXJ2 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trerf1Q8BXJ2 Pcgf5-211ENSMUST00000225920 6443 ntBASIC16.07■□□□□ 0.16
Trerf1Q8BXJ2 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Trerf1Q8BXJ2 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trerf1Q8BXJ2 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trerf1Q8BXJ2 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Trerf1Q8BXJ2 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
Trerf1Q8BXJ2 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trerf1Q8BXJ2 Gm6257-201ENSMUST00000163864 910 ntBASIC16.07■□□□□ 0.16
Trerf1Q8BXJ2 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Trerf1Q8BXJ2 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC16.07■□□□□ 0.16
Trerf1Q8BXJ2 Mzt1-203ENSMUST00000227948 952 ntBASIC16.07■□□□□ 0.16
Trerf1Q8BXJ2 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trerf1Q8BXJ2 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trerf1Q8BXJ2 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC16.07■□□□□ 0.16
Trerf1Q8BXJ2 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trerf1Q8BXJ2 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trerf1Q8BXJ2 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms