Protein–RNA interactions for Protein: Q8BWU1

Sprn, Shadow of prion protein, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SprnQ8BWU1 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SprnQ8BWU1 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SprnQ8BWU1 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SprnQ8BWU1 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SprnQ8BWU1 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SprnQ8BWU1 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
SprnQ8BWU1 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SprnQ8BWU1 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
SprnQ8BWU1 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
SprnQ8BWU1 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC13.47□□□□□ -0.25
SprnQ8BWU1 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SprnQ8BWU1 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC13.47□□□□□ -0.25
SprnQ8BWU1 Gm25406-201ENSMUST00000157599 105 ntBASIC13.47□□□□□ -0.25
SprnQ8BWU1 Gm7556-201ENSMUST00000201178 1084 ntBASIC13.47□□□□□ -0.25
SprnQ8BWU1 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
SprnQ8BWU1 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SprnQ8BWU1 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SprnQ8BWU1 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
SprnQ8BWU1 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
SprnQ8BWU1 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
SprnQ8BWU1 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
SprnQ8BWU1 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
SprnQ8BWU1 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SprnQ8BWU1 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC13.47□□□□□ -0.25
SprnQ8BWU1 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
SprnQ8BWU1 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SprnQ8BWU1 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
SprnQ8BWU1 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SprnQ8BWU1 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
SprnQ8BWU1 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC13.47□□□□□ -0.25
SprnQ8BWU1 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
SprnQ8BWU1 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
SprnQ8BWU1 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
SprnQ8BWU1 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
SprnQ8BWU1 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
SprnQ8BWU1 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
SprnQ8BWU1 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
SprnQ8BWU1 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
SprnQ8BWU1 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
SprnQ8BWU1 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
SprnQ8BWU1 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
SprnQ8BWU1 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC13.46□□□□□ -0.25
SprnQ8BWU1 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
SprnQ8BWU1 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
SprnQ8BWU1 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
SprnQ8BWU1 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC13.46□□□□□ -0.25
SprnQ8BWU1 Otx2os1-206ENSMUST00000228153 787 ntBASIC13.46□□□□□ -0.25
SprnQ8BWU1 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
SprnQ8BWU1 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
SprnQ8BWU1 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
SprnQ8BWU1 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
SprnQ8BWU1 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC13.46□□□□□ -0.25
SprnQ8BWU1 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC13.46□□□□□ -0.25
SprnQ8BWU1 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
SprnQ8BWU1 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
SprnQ8BWU1 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
SprnQ8BWU1 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
SprnQ8BWU1 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
SprnQ8BWU1 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SprnQ8BWU1 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
SprnQ8BWU1 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
SprnQ8BWU1 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SprnQ8BWU1 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SprnQ8BWU1 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC13.45□□□□□ -0.26
SprnQ8BWU1 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
SprnQ8BWU1 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SprnQ8BWU1 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SprnQ8BWU1 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
SprnQ8BWU1 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC13.45□□□□□ -0.26
SprnQ8BWU1 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SprnQ8BWU1 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC13.45□□□□□ -0.26
SprnQ8BWU1 Gm44645-201ENSMUST00000205492 1653 ntBASIC13.45□□□□□ -0.26
SprnQ8BWU1 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC13.45□□□□□ -0.26
SprnQ8BWU1 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SprnQ8BWU1 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC13.45□□□□□ -0.26
SprnQ8BWU1 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SprnQ8BWU1 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC13.45□□□□□ -0.26
SprnQ8BWU1 Gm27742-201ENSMUST00000184667 60 ntBASIC13.45□□□□□ -0.26
SprnQ8BWU1 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SprnQ8BWU1 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
SprnQ8BWU1 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SprnQ8BWU1 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SprnQ8BWU1 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC13.45□□□□□ -0.26
SprnQ8BWU1 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
SprnQ8BWU1 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SprnQ8BWU1 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SprnQ8BWU1 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SprnQ8BWU1 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
SprnQ8BWU1 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SprnQ8BWU1 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
SprnQ8BWU1 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SprnQ8BWU1 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
SprnQ8BWU1 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
SprnQ8BWU1 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
SprnQ8BWU1 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SprnQ8BWU1 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SprnQ8BWU1 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
SprnQ8BWU1 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SprnQ8BWU1 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
SprnQ8BWU1 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 67.6 ms