Protein–RNA interactions for Protein: Q8BUP8

Fam43a, Protein FAM43A, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam43aQ8BUP8 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Fam43aQ8BUP8 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Fam43aQ8BUP8 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Fam43aQ8BUP8 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Fam43aQ8BUP8 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Fam43aQ8BUP8 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Fam43aQ8BUP8 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Fam43aQ8BUP8 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Fam43aQ8BUP8 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Fam43aQ8BUP8 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Fam43aQ8BUP8 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Fam43aQ8BUP8 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Fam43aQ8BUP8 Gm9889-202ENSMUST00000206983 1577 ntBASIC17.07■□□□□ 0.32
Fam43aQ8BUP8 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Fam43aQ8BUP8 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Fam43aQ8BUP8 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Fam43aQ8BUP8 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
Fam43aQ8BUP8 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Fam43aQ8BUP8 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Fam43aQ8BUP8 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Fam43aQ8BUP8 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Fam43aQ8BUP8 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
Fam43aQ8BUP8 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Fam43aQ8BUP8 Gm10052-201ENSMUST00000168019 960 ntBASIC17.07■□□□□ 0.32
Fam43aQ8BUP8 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Fam43aQ8BUP8 Gm36967-201ENSMUST00000193814 266 ntBASIC17.07■□□□□ 0.32
Fam43aQ8BUP8 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC17.07■□□□□ 0.32
Fam43aQ8BUP8 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Fam43aQ8BUP8 Gm7729-201ENSMUST00000050143 801 ntBASIC17.07■□□□□ 0.32
Fam43aQ8BUP8 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Fam43aQ8BUP8 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Fam43aQ8BUP8 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Fam43aQ8BUP8 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Fam43aQ8BUP8 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Fam43aQ8BUP8 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Fam43aQ8BUP8 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Fam43aQ8BUP8 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Fam43aQ8BUP8 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC17.07■□□□□ 0.32
Fam43aQ8BUP8 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
Fam43aQ8BUP8 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Fam43aQ8BUP8 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Fam43aQ8BUP8 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Fam43aQ8BUP8 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Fam43aQ8BUP8 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Fam43aQ8BUP8 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Fam43aQ8BUP8 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Fam43aQ8BUP8 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Fam43aQ8BUP8 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
Fam43aQ8BUP8 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Fam43aQ8BUP8 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Fam43aQ8BUP8 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Fam43aQ8BUP8 Gm27742-201ENSMUST00000184667 60 ntBASIC17.06■□□□□ 0.32
Fam43aQ8BUP8 Gm21362-201ENSMUST00000194272 928 ntBASIC17.06■□□□□ 0.32
Fam43aQ8BUP8 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Fam43aQ8BUP8 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Fam43aQ8BUP8 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Fam43aQ8BUP8 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Fam43aQ8BUP8 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Fam43aQ8BUP8 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC17.06■□□□□ 0.32
Fam43aQ8BUP8 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Fam43aQ8BUP8 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC17.06■□□□□ 0.32
Fam43aQ8BUP8 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
Fam43aQ8BUP8 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Fam43aQ8BUP8 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Fam43aQ8BUP8 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC17.05■□□□□ 0.32
Fam43aQ8BUP8 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Fam43aQ8BUP8 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC17.05■□□□□ 0.32
Fam43aQ8BUP8 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Fam43aQ8BUP8 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Fam43aQ8BUP8 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Fam43aQ8BUP8 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Fam43aQ8BUP8 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Fam43aQ8BUP8 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
Fam43aQ8BUP8 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Fam43aQ8BUP8 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Fam43aQ8BUP8 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Fam43aQ8BUP8 Gm14859-201ENSMUST00000117752 357 ntBASIC17.05■□□□□ 0.32
Fam43aQ8BUP8 Gm14464-201ENSMUST00000119658 1254 ntBASIC17.05■□□□□ 0.32
Fam43aQ8BUP8 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Fam43aQ8BUP8 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
Fam43aQ8BUP8 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Fam43aQ8BUP8 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Fam43aQ8BUP8 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
Fam43aQ8BUP8 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Fam43aQ8BUP8 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Fam43aQ8BUP8 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC17.05■□□□□ 0.32
Fam43aQ8BUP8 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
Fam43aQ8BUP8 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Fam43aQ8BUP8 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Fam43aQ8BUP8 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Fam43aQ8BUP8 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Fam43aQ8BUP8 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Fam43aQ8BUP8 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Fam43aQ8BUP8 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Fam43aQ8BUP8 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Fam43aQ8BUP8 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Fam43aQ8BUP8 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Fam43aQ8BUP8 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Fam43aQ8BUP8 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Fam43aQ8BUP8 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms