Protein–RNA interactions for Protein: Q8BRJ4

Ppp1r3e, Protein phosphatase 1 regulatory subunit 3E, mousemouse

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ppp1r3eQ8BRJ4 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Ppp1r3eQ8BRJ4 Gm9856-201ENSMUST00000217077 2578 ntBASIC14.29□□□□□ -0.12
Ppp1r3eQ8BRJ4 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ppp1r3eQ8BRJ4 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ppp1r3eQ8BRJ4 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC14.29□□□□□ -0.12
Ppp1r3eQ8BRJ4 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC14.29□□□□□ -0.12
Ppp1r3eQ8BRJ4 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ppp1r3eQ8BRJ4 Gm43205-201ENSMUST00000198622 1968 ntBASIC14.29□□□□□ -0.12
Ppp1r3eQ8BRJ4 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ppp1r3eQ8BRJ4 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ppp1r3eQ8BRJ4 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ppp1r3eQ8BRJ4 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Ppp1r3eQ8BRJ4 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Ppp1r3eQ8BRJ4 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ppp1r3eQ8BRJ4 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ppp1r3eQ8BRJ4 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ppp1r3eQ8BRJ4 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ppp1r3eQ8BRJ4 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ppp1r3eQ8BRJ4 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ppp1r3eQ8BRJ4 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ppp1r3eQ8BRJ4 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ppp1r3eQ8BRJ4 Gm7286-201ENSMUST00000182691 1007 ntBASIC14.28□□□□□ -0.12
Ppp1r3eQ8BRJ4 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC14.28□□□□□ -0.12
Ppp1r3eQ8BRJ4 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ppp1r3eQ8BRJ4 Gm5587-201ENSMUST00000206270 674 ntBASIC14.28□□□□□ -0.12
Ppp1r3eQ8BRJ4 Gm19164-201ENSMUST00000210667 640 ntBASIC14.28□□□□□ -0.12
Ppp1r3eQ8BRJ4 AC162938.1-201ENSMUST00000213140 2323 ntBASIC14.28□□□□□ -0.12
Ppp1r3eQ8BRJ4 Nupl1-207ENSMUST00000225311 2475 ntBASIC14.28□□□□□ -0.12
Ppp1r3eQ8BRJ4 Vti1a-206ENSMUST00000225529 1244 ntBASIC14.28□□□□□ -0.12
Ppp1r3eQ8BRJ4 AC117588.1-201ENSMUST00000228510 999 ntBASIC14.28□□□□□ -0.12
Ppp1r3eQ8BRJ4 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ppp1r3eQ8BRJ4 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ppp1r3eQ8BRJ4 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ppp1r3eQ8BRJ4 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ppp1r3eQ8BRJ4 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC14.28□□□□□ -0.12
Ppp1r3eQ8BRJ4 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Ppp1r3eQ8BRJ4 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Ppp1r3eQ8BRJ4 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ppp1r3eQ8BRJ4 Carlr-201ENSMUST00000181515 2574 ntBASIC14.28□□□□□ -0.12
Ppp1r3eQ8BRJ4 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ppp1r3eQ8BRJ4 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Ppp1r3eQ8BRJ4 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Ppp1r3eQ8BRJ4 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Ppp1r3eQ8BRJ4 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ppp1r3eQ8BRJ4 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ppp1r3eQ8BRJ4 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ppp1r3eQ8BRJ4 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ppp1r3eQ8BRJ4 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ppp1r3eQ8BRJ4 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ppp1r3eQ8BRJ4 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ppp1r3eQ8BRJ4 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC14.27□□□□□ -0.13
Ppp1r3eQ8BRJ4 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ppp1r3eQ8BRJ4 Gm29518-201ENSMUST00000190858 372 ntBASIC14.27□□□□□ -0.13
Ppp1r3eQ8BRJ4 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC14.27□□□□□ -0.13
Ppp1r3eQ8BRJ4 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC14.27□□□□□ -0.13
Ppp1r3eQ8BRJ4 Umpk-ps-201ENSMUST00000211897 827 ntBASIC14.27□□□□□ -0.13
Ppp1r3eQ8BRJ4 Gm9172-201ENSMUST00000212092 954 ntBASIC14.27□□□□□ -0.13
Ppp1r3eQ8BRJ4 AC127349.1-201ENSMUST00000224590 266 ntBASIC14.27□□□□□ -0.13
Ppp1r3eQ8BRJ4 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ppp1r3eQ8BRJ4 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ppp1r3eQ8BRJ4 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ppp1r3eQ8BRJ4 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ppp1r3eQ8BRJ4 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Ppp1r3eQ8BRJ4 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Ppp1r3eQ8BRJ4 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC14.27□□□□□ -0.13
Ppp1r3eQ8BRJ4 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ppp1r3eQ8BRJ4 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ppp1r3eQ8BRJ4 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ppp1r3eQ8BRJ4 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ppp1r3eQ8BRJ4 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ppp1r3eQ8BRJ4 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Ppp1r3eQ8BRJ4 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ppp1r3eQ8BRJ4 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC14.26□□□□□ -0.13
Ppp1r3eQ8BRJ4 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ppp1r3eQ8BRJ4 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ppp1r3eQ8BRJ4 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ppp1r3eQ8BRJ4 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ppp1r3eQ8BRJ4 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ppp1r3eQ8BRJ4 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC14.26□□□□□ -0.13
Ppp1r3eQ8BRJ4 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ppp1r3eQ8BRJ4 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Ppp1r3eQ8BRJ4 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ppp1r3eQ8BRJ4 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ppp1r3eQ8BRJ4 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ppp1r3eQ8BRJ4 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ppp1r3eQ8BRJ4 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ppp1r3eQ8BRJ4 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Ppp1r3eQ8BRJ4 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
Ppp1r3eQ8BRJ4 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
Ppp1r3eQ8BRJ4 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC14.26□□□□□ -0.13
Ppp1r3eQ8BRJ4 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ppp1r3eQ8BRJ4 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ppp1r3eQ8BRJ4 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ppp1r3eQ8BRJ4 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ppp1r3eQ8BRJ4 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ppp1r3eQ8BRJ4 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC14.26□□□□□ -0.13
Ppp1r3eQ8BRJ4 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ppp1r3eQ8BRJ4 Celf4-206ENSMUST00000224553 1729 ntBASIC14.26□□□□□ -0.13
Ppp1r3eQ8BRJ4 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ppp1r3eQ8BRJ4 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms