Protein–RNA interactions for Protein: Q8BRF7

Scfd1, Sec1 family domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scfd1Q8BRF7 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Scfd1Q8BRF7 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC17.35■□□□□ 0.37
Scfd1Q8BRF7 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Scfd1Q8BRF7 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Scfd1Q8BRF7 AC093043.3-201ENSMUST00000226531 2273 ntBASIC17.35■□□□□ 0.37
Scfd1Q8BRF7 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC17.35■□□□□ 0.37
Scfd1Q8BRF7 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Scfd1Q8BRF7 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Scfd1Q8BRF7 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Scfd1Q8BRF7 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Scfd1Q8BRF7 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Scfd1Q8BRF7 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC17.35■□□□□ 0.37
Scfd1Q8BRF7 Ccdc166-201ENSMUST00000182172 2584 ntBASIC17.35■□□□□ 0.37
Scfd1Q8BRF7 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Scfd1Q8BRF7 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Scfd1Q8BRF7 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Scfd1Q8BRF7 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Scfd1Q8BRF7 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Scfd1Q8BRF7 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Scfd1Q8BRF7 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Scfd1Q8BRF7 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Scfd1Q8BRF7 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC17.34■□□□□ 0.37
Scfd1Q8BRF7 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Scfd1Q8BRF7 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Scfd1Q8BRF7 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Scfd1Q8BRF7 Gm22065-201ENSMUST00000103753 110 ntBASIC17.34■□□□□ 0.37
Scfd1Q8BRF7 Gm22066-201ENSMUST00000103761 110 ntBASIC17.34■□□□□ 0.37
Scfd1Q8BRF7 Gm24932-201ENSMUST00000103763 110 ntBASIC17.34■□□□□ 0.37
Scfd1Q8BRF7 Gm24115-201ENSMUST00000103799 110 ntBASIC17.34■□□□□ 0.37
Scfd1Q8BRF7 Gm22190-201ENSMUST00000103827 110 ntBASIC17.34■□□□□ 0.37
Scfd1Q8BRF7 Gm22191-201ENSMUST00000103831 110 ntBASIC17.34■□□□□ 0.37
Scfd1Q8BRF7 Gm24721-201ENSMUST00000103849 110 ntBASIC17.34■□□□□ 0.37
Scfd1Q8BRF7 Gm28018-201ENSMUST00000103869 110 ntBASIC17.34■□□□□ 0.37
Scfd1Q8BRF7 Gm26399-201ENSMUST00000103937 110 ntBASIC17.34■□□□□ 0.37
Scfd1Q8BRF7 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Scfd1Q8BRF7 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Scfd1Q8BRF7 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC17.34■□□□□ 0.37
Scfd1Q8BRF7 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Scfd1Q8BRF7 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC17.34■□□□□ 0.37
Scfd1Q8BRF7 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
Scfd1Q8BRF7 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Scfd1Q8BRF7 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC17.34■□□□□ 0.37
Scfd1Q8BRF7 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC17.34■□□□□ 0.37
Scfd1Q8BRF7 Gm25349-201ENSMUST00000177728 110 ntBASIC17.34■□□□□ 0.37
Scfd1Q8BRF7 Gm23616-201ENSMUST00000177797 110 ntBASIC17.34■□□□□ 0.37
Scfd1Q8BRF7 Gm25871-201ENSMUST00000177816 110 ntBASIC17.34■□□□□ 0.37
Scfd1Q8BRF7 Gm24752-201ENSMUST00000178240 110 ntBASIC17.34■□□□□ 0.37
Scfd1Q8BRF7 Gm24496-201ENSMUST00000178287 110 ntBASIC17.34■□□□□ 0.37
Scfd1Q8BRF7 Gm25649-201ENSMUST00000178476 110 ntBASIC17.34■□□□□ 0.37
Scfd1Q8BRF7 Gm25548-201ENSMUST00000178681 110 ntBASIC17.34■□□□□ 0.37
Scfd1Q8BRF7 Gm23147-201ENSMUST00000178841 110 ntBASIC17.34■□□□□ 0.37
Scfd1Q8BRF7 Gm26095-201ENSMUST00000179270 110 ntBASIC17.34■□□□□ 0.37
Scfd1Q8BRF7 Gm22171-201ENSMUST00000179283 110 ntBASIC17.34■□□□□ 0.37
Scfd1Q8BRF7 Gm23936-201ENSMUST00000179354 110 ntBASIC17.34■□□□□ 0.37
Scfd1Q8BRF7 Gm22619-201ENSMUST00000179516 110 ntBASIC17.34■□□□□ 0.37
Scfd1Q8BRF7 Gm25255-201ENSMUST00000179579 110 ntBASIC17.34■□□□□ 0.37
Scfd1Q8BRF7 Gm24755-201ENSMUST00000179691 110 ntBASIC17.34■□□□□ 0.37
Scfd1Q8BRF7 Gm26506-201ENSMUST00000179692 110 ntBASIC17.34■□□□□ 0.37
Scfd1Q8BRF7 Gm25086-201ENSMUST00000179931 110 ntBASIC17.34■□□□□ 0.37
Scfd1Q8BRF7 Gm23243-201ENSMUST00000180047 110 ntBASIC17.34■□□□□ 0.37
Scfd1Q8BRF7 Gm24659-201ENSMUST00000180212 110 ntBASIC17.34■□□□□ 0.37
Scfd1Q8BRF7 Gm24169-201ENSMUST00000180244 110 ntBASIC17.34■□□□□ 0.37
Scfd1Q8BRF7 Gm23689-201ENSMUST00000180354 110 ntBASIC17.34■□□□□ 0.37
Scfd1Q8BRF7 Gm27359-201ENSMUST00000184153 110 ntBASIC17.34■□□□□ 0.37
Scfd1Q8BRF7 Gm27785-201ENSMUST00000184268 110 ntBASIC17.34■□□□□ 0.37
Scfd1Q8BRF7 Gm27466-201ENSMUST00000184396 110 ntBASIC17.34■□□□□ 0.37
Scfd1Q8BRF7 Gm27703-201ENSMUST00000184836 110 ntBASIC17.34■□□□□ 0.37
Scfd1Q8BRF7 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC17.34■□□□□ 0.37
Scfd1Q8BRF7 AC166341.4-201ENSMUST00000220625 123 ntBASIC17.34■□□□□ 0.37
Scfd1Q8BRF7 AC131187.1-201ENSMUST00000224567 809 ntBASIC17.34■□□□□ 0.37
Scfd1Q8BRF7 AC131710.1-201ENSMUST00000228336 990 ntBASIC17.34■□□□□ 0.37
Scfd1Q8BRF7 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Scfd1Q8BRF7 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Scfd1Q8BRF7 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Scfd1Q8BRF7 Gm43548-201ENSMUST00000197139 2353 ntBASIC17.33■□□□□ 0.37
Scfd1Q8BRF7 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Scfd1Q8BRF7 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Scfd1Q8BRF7 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Scfd1Q8BRF7 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Scfd1Q8BRF7 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Scfd1Q8BRF7 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Scfd1Q8BRF7 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Scfd1Q8BRF7 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Scfd1Q8BRF7 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC17.33■□□□□ 0.37
Scfd1Q8BRF7 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.37
Scfd1Q8BRF7 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Scfd1Q8BRF7 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Scfd1Q8BRF7 Gm8242-201ENSMUST00000193029 1420 ntBASIC17.33■□□□□ 0.36
Scfd1Q8BRF7 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Scfd1Q8BRF7 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC17.33■□□□□ 0.36
Scfd1Q8BRF7 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Scfd1Q8BRF7 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Scfd1Q8BRF7 Gm25287-201ENSMUST00000103846 110 ntBASIC17.33■□□□□ 0.36
Scfd1Q8BRF7 Gm22918-201ENSMUST00000103855 110 ntBASIC17.33■□□□□ 0.36
Scfd1Q8BRF7 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC17.33■□□□□ 0.36
Scfd1Q8BRF7 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC17.33■□□□□ 0.36
Scfd1Q8BRF7 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.36
Scfd1Q8BRF7 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Scfd1Q8BRF7 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC17.33■□□□□ 0.36
Scfd1Q8BRF7 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC17.33■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms