Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Chmp2bQ8BJF9 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Chmp2bQ8BJF9 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Chmp2bQ8BJF9 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Chmp2bQ8BJF9 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Chmp2bQ8BJF9 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Chmp2bQ8BJF9 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC15.65■□□□□ 0.1
Chmp2bQ8BJF9 Rprl3-201ENSMUST00000157400 290 ntBASIC15.65■□□□□ 0.1
Chmp2bQ8BJF9 Gm6659-201ENSMUST00000174752 547 ntBASIC15.65■□□□□ 0.1
Chmp2bQ8BJF9 Gm44454-201ENSMUST00000198541 138 ntBASIC15.65■□□□□ 0.1
Chmp2bQ8BJF9 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Chmp2bQ8BJF9 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC15.65■□□□□ 0.1
Chmp2bQ8BJF9 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC15.65■□□□□ 0.1
Chmp2bQ8BJF9 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC15.65■□□□□ 0.1
Chmp2bQ8BJF9 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Chmp2bQ8BJF9 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Chmp2bQ8BJF9 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Chmp2bQ8BJF9 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Chmp2bQ8BJF9 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Chmp2bQ8BJF9 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Chmp2bQ8BJF9 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Chmp2bQ8BJF9 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Chmp2bQ8BJF9 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Chmp2bQ8BJF9 Gm37728-201ENSMUST00000195025 2292 ntBASIC15.65■□□□□ 0.1
Chmp2bQ8BJF9 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Chmp2bQ8BJF9 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Chmp2bQ8BJF9 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Chmp2bQ8BJF9 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Chmp2bQ8BJF9 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
Chmp2bQ8BJF9 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Chmp2bQ8BJF9 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC15.64■□□□□ 0.09
Chmp2bQ8BJF9 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC15.64■□□□□ 0.09
Chmp2bQ8BJF9 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
Chmp2bQ8BJF9 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Chmp2bQ8BJF9 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Chmp2bQ8BJF9 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Chmp2bQ8BJF9 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Chmp2bQ8BJF9 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Chmp2bQ8BJF9 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC15.64■□□□□ 0.09
Chmp2bQ8BJF9 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC15.64■□□□□ 0.09
Chmp2bQ8BJF9 Gm9172-201ENSMUST00000212092 954 ntBASIC15.64■□□□□ 0.09
Chmp2bQ8BJF9 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC15.64■□□□□ 0.09
Chmp2bQ8BJF9 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC15.64■□□□□ 0.09
Chmp2bQ8BJF9 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Chmp2bQ8BJF9 Efs-202ENSMUST00000227037 2540 ntBASIC15.64■□□□□ 0.09
Chmp2bQ8BJF9 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Chmp2bQ8BJF9 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Chmp2bQ8BJF9 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC15.64■□□□□ 0.09
Chmp2bQ8BJF9 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Chmp2bQ8BJF9 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Chmp2bQ8BJF9 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Chmp2bQ8BJF9 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Chmp2bQ8BJF9 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Chmp2bQ8BJF9 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Chmp2bQ8BJF9 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Chmp2bQ8BJF9 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Chmp2bQ8BJF9 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC15.63■□□□□ 0.09
Chmp2bQ8BJF9 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Chmp2bQ8BJF9 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
Chmp2bQ8BJF9 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Chmp2bQ8BJF9 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Chmp2bQ8BJF9 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Chmp2bQ8BJF9 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Chmp2bQ8BJF9 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Chmp2bQ8BJF9 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC15.63■□□□□ 0.09
Chmp2bQ8BJF9 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Chmp2bQ8BJF9 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Chmp2bQ8BJF9 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Chmp2bQ8BJF9 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Chmp2bQ8BJF9 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Chmp2bQ8BJF9 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Chmp2bQ8BJF9 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Chmp2bQ8BJF9 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Chmp2bQ8BJF9 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC15.63■□□□□ 0.09
Chmp2bQ8BJF9 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Chmp2bQ8BJF9 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Chmp2bQ8BJF9 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Chmp2bQ8BJF9 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Chmp2bQ8BJF9 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Chmp2bQ8BJF9 Gm5049-201ENSMUST00000195878 1590 ntBASIC15.62■□□□□ 0.09
Chmp2bQ8BJF9 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Chmp2bQ8BJF9 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Chmp2bQ8BJF9 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Chmp2bQ8BJF9 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Chmp2bQ8BJF9 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Chmp2bQ8BJF9 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Chmp2bQ8BJF9 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Chmp2bQ8BJF9 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Chmp2bQ8BJF9 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC15.62■□□□□ 0.09
Chmp2bQ8BJF9 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC15.62■□□□□ 0.09
Chmp2bQ8BJF9 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC15.62■□□□□ 0.09
Chmp2bQ8BJF9 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC15.62■□□□□ 0.09
Chmp2bQ8BJF9 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Chmp2bQ8BJF9 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Chmp2bQ8BJF9 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Chmp2bQ8BJF9 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Chmp2bQ8BJF9 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Chmp2bQ8BJF9 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Chmp2bQ8BJF9 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Chmp2bQ8BJF9 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 11.6 ms