Protein–RNA interactions for Protein: Q8BIZ0

Pcdh20, Protocadherin-20, mousemouse

Predictions only

Length 952 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20Q8BIZ0 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Pcdh20Q8BIZ0 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
Pcdh20Q8BIZ0 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC14.91□□□□□ -0.02
Pcdh20Q8BIZ0 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Pcdh20Q8BIZ0 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdh20Q8BIZ0 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Pcdh20Q8BIZ0 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC14.91□□□□□ -0.02
Pcdh20Q8BIZ0 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdh20Q8BIZ0 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdh20Q8BIZ0 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdh20Q8BIZ0 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdh20Q8BIZ0 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdh20Q8BIZ0 Gm37728-201ENSMUST00000195025 2292 ntBASIC14.91□□□□□ -0.02
Pcdh20Q8BIZ0 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdh20Q8BIZ0 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdh20Q8BIZ0 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdh20Q8BIZ0 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdh20Q8BIZ0 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdh20Q8BIZ0 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdh20Q8BIZ0 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdh20Q8BIZ0 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdh20Q8BIZ0 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdh20Q8BIZ0 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdh20Q8BIZ0 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdh20Q8BIZ0 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdh20Q8BIZ0 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdh20Q8BIZ0 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC14.9□□□□□ -0.02
Pcdh20Q8BIZ0 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdh20Q8BIZ0 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdh20Q8BIZ0 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC14.9□□□□□ -0.02
Pcdh20Q8BIZ0 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdh20Q8BIZ0 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdh20Q8BIZ0 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC14.9□□□□□ -0.02
Pcdh20Q8BIZ0 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdh20Q8BIZ0 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdh20Q8BIZ0 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC14.9□□□□□ -0.02
Pcdh20Q8BIZ0 Gm5864-201ENSMUST00000202263 970 ntBASIC14.9□□□□□ -0.02
Pcdh20Q8BIZ0 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC14.9□□□□□ -0.02
Pcdh20Q8BIZ0 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdh20Q8BIZ0 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdh20Q8BIZ0 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdh20Q8BIZ0 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdh20Q8BIZ0 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdh20Q8BIZ0 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdh20Q8BIZ0 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdh20Q8BIZ0 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC14.9□□□□□ -0.02
Pcdh20Q8BIZ0 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC14.9□□□□□ -0.02
Pcdh20Q8BIZ0 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdh20Q8BIZ0 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdh20Q8BIZ0 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdh20Q8BIZ0 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC14.9□□□□□ -0.02
Pcdh20Q8BIZ0 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdh20Q8BIZ0 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdh20Q8BIZ0 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdh20Q8BIZ0 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdh20Q8BIZ0 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdh20Q8BIZ0 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdh20Q8BIZ0 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdh20Q8BIZ0 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Pcdh20Q8BIZ0 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdh20Q8BIZ0 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdh20Q8BIZ0 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdh20Q8BIZ0 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdh20Q8BIZ0 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdh20Q8BIZ0 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdh20Q8BIZ0 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
Pcdh20Q8BIZ0 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
Pcdh20Q8BIZ0 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Pcdh20Q8BIZ0 Gm13884-201ENSMUST00000118103 829 ntBASIC14.89□□□□□ -0.03
Pcdh20Q8BIZ0 Gm25406-201ENSMUST00000157599 105 ntBASIC14.89□□□□□ -0.03
Pcdh20Q8BIZ0 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC14.89□□□□□ -0.03
Pcdh20Q8BIZ0 Mir6404-201ENSMUST00000183699 94 ntBASIC14.89□□□□□ -0.03
Pcdh20Q8BIZ0 Gm9172-201ENSMUST00000212092 954 ntBASIC14.89□□□□□ -0.03
Pcdh20Q8BIZ0 AC160338.1-201ENSMUST00000214232 705 ntBASIC14.89□□□□□ -0.03
Pcdh20Q8BIZ0 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdh20Q8BIZ0 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdh20Q8BIZ0 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Pcdh20Q8BIZ0 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC14.89□□□□□ -0.03
Pcdh20Q8BIZ0 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdh20Q8BIZ0 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdh20Q8BIZ0 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdh20Q8BIZ0 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC14.89□□□□□ -0.03
Pcdh20Q8BIZ0 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Pcdh20Q8BIZ0 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdh20Q8BIZ0 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdh20Q8BIZ0 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdh20Q8BIZ0 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdh20Q8BIZ0 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC14.89□□□□□ -0.03
Pcdh20Q8BIZ0 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdh20Q8BIZ0 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdh20Q8BIZ0 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdh20Q8BIZ0 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Pcdh20Q8BIZ0 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdh20Q8BIZ0 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdh20Q8BIZ0 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
Pcdh20Q8BIZ0 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdh20Q8BIZ0 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdh20Q8BIZ0 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Pcdh20Q8BIZ0 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdh20Q8BIZ0 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms