Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ccdc40Q8BI79 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ccdc40Q8BI79 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ccdc40Q8BI79 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Ccdc40Q8BI79 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC15.95■□□□□ 0.14
Ccdc40Q8BI79 Gm7669-201ENSMUST00000210184 1603 ntBASIC15.95■□□□□ 0.14
Ccdc40Q8BI79 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ccdc40Q8BI79 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Ccdc40Q8BI79 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC15.95■□□□□ 0.14
Ccdc40Q8BI79 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ccdc40Q8BI79 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ccdc40Q8BI79 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC15.95■□□□□ 0.14
Ccdc40Q8BI79 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Ccdc40Q8BI79 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC15.95■□□□□ 0.14
Ccdc40Q8BI79 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC15.95■□□□□ 0.14
Ccdc40Q8BI79 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC15.95■□□□□ 0.14
Ccdc40Q8BI79 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ccdc40Q8BI79 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC15.95■□□□□ 0.14
Ccdc40Q8BI79 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Ccdc40Q8BI79 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ccdc40Q8BI79 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ccdc40Q8BI79 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ccdc40Q8BI79 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC15.95■□□□□ 0.14
Ccdc40Q8BI79 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC15.95■□□□□ 0.14
Ccdc40Q8BI79 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ccdc40Q8BI79 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
Ccdc40Q8BI79 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Ccdc40Q8BI79 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ccdc40Q8BI79 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ccdc40Q8BI79 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Ccdc40Q8BI79 Gm4459-201ENSMUST00000118750 468 ntBASIC15.94■□□□□ 0.14
Ccdc40Q8BI79 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
Ccdc40Q8BI79 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ccdc40Q8BI79 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC15.94■□□□□ 0.14
Ccdc40Q8BI79 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC15.94■□□□□ 0.14
Ccdc40Q8BI79 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC15.94■□□□□ 0.14
Ccdc40Q8BI79 AC117588.1-201ENSMUST00000228510 999 ntBASIC15.94■□□□□ 0.14
Ccdc40Q8BI79 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ccdc40Q8BI79 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ccdc40Q8BI79 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ccdc40Q8BI79 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ccdc40Q8BI79 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Ccdc40Q8BI79 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ccdc40Q8BI79 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ccdc40Q8BI79 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
Ccdc40Q8BI79 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC15.94■□□□□ 0.14
Ccdc40Q8BI79 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ccdc40Q8BI79 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ccdc40Q8BI79 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ccdc40Q8BI79 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC15.94■□□□□ 0.14
Ccdc40Q8BI79 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ccdc40Q8BI79 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ccdc40Q8BI79 Gm38042-201ENSMUST00000191614 5208 ntBASIC15.93■□□□□ 0.14
Ccdc40Q8BI79 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ccdc40Q8BI79 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ccdc40Q8BI79 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ccdc40Q8BI79 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC15.93■□□□□ 0.14
Ccdc40Q8BI79 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ccdc40Q8BI79 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ccdc40Q8BI79 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC15.93■□□□□ 0.14
Ccdc40Q8BI79 Gm7935-201ENSMUST00000100555 1278 ntBASIC15.93■□□□□ 0.14
Ccdc40Q8BI79 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC15.93■□□□□ 0.14
Ccdc40Q8BI79 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC15.93■□□□□ 0.14
Ccdc40Q8BI79 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Ccdc40Q8BI79 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC15.93■□□□□ 0.14
Ccdc40Q8BI79 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ccdc40Q8BI79 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ccdc40Q8BI79 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ccdc40Q8BI79 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ccdc40Q8BI79 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ccdc40Q8BI79 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Ccdc40Q8BI79 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ccdc40Q8BI79 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ccdc40Q8BI79 AC174678.1-201ENSMUST00000228007 2749 ntBASIC15.93■□□□□ 0.14
Ccdc40Q8BI79 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC15.93■□□□□ 0.14
Ccdc40Q8BI79 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC15.93■□□□□ 0.14
Ccdc40Q8BI79 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ccdc40Q8BI79 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ccdc40Q8BI79 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Ccdc40Q8BI79 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Ccdc40Q8BI79 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ccdc40Q8BI79 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ccdc40Q8BI79 Gm27528-202ENSMUST00000222916 2012 ntBASIC15.92■□□□□ 0.14
Ccdc40Q8BI79 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ccdc40Q8BI79 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ccdc40Q8BI79 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ccdc40Q8BI79 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Ccdc40Q8BI79 Gm5837-201ENSMUST00000191844 1369 ntBASIC15.92■□□□□ 0.14
Ccdc40Q8BI79 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ccdc40Q8BI79 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ccdc40Q8BI79 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
Ccdc40Q8BI79 Gm12644-201ENSMUST00000119935 606 ntBASIC15.92■□□□□ 0.14
Ccdc40Q8BI79 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Ccdc40Q8BI79 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC15.92■□□□□ 0.14
Ccdc40Q8BI79 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ccdc40Q8BI79 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC15.92■□□□□ 0.14
Ccdc40Q8BI79 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC15.92■□□□□ 0.14
Ccdc40Q8BI79 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ccdc40Q8BI79 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ccdc40Q8BI79 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 55.3 ms