Protein–RNA interactions for Protein: Q8BH88

Depdc1b, DEP domain-containing protein 1B, mousemouse

Predictions only

Length 529 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1bQ8BH88 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Depdc1bQ8BH88 Gm8097-201ENSMUST00000117903 829 ntBASIC16.59■□□□□ 0.25
Depdc1bQ8BH88 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Depdc1bQ8BH88 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
Depdc1bQ8BH88 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Depdc1bQ8BH88 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC16.59■□□□□ 0.25
Depdc1bQ8BH88 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC16.59■□□□□ 0.25
Depdc1bQ8BH88 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Depdc1bQ8BH88 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Depdc1bQ8BH88 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Depdc1bQ8BH88 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC16.59■□□□□ 0.25
Depdc1bQ8BH88 Gm37584-201ENSMUST00000193595 1290 ntBASIC16.59■□□□□ 0.25
Depdc1bQ8BH88 AC154757.1-201ENSMUST00000228289 336 ntBASIC16.59■□□□□ 0.25
Depdc1bQ8BH88 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Depdc1bQ8BH88 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Depdc1bQ8BH88 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Depdc1bQ8BH88 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC16.59■□□□□ 0.25
Depdc1bQ8BH88 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Depdc1bQ8BH88 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Depdc1bQ8BH88 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Depdc1bQ8BH88 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Depdc1bQ8BH88 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Depdc1bQ8BH88 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Depdc1bQ8BH88 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Depdc1bQ8BH88 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Depdc1bQ8BH88 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Depdc1bQ8BH88 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Depdc1bQ8BH88 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Depdc1bQ8BH88 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Depdc1bQ8BH88 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
Depdc1bQ8BH88 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
Depdc1bQ8BH88 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Depdc1bQ8BH88 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
Depdc1bQ8BH88 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Depdc1bQ8BH88 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Depdc1bQ8BH88 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Depdc1bQ8BH88 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC16.58■□□□□ 0.24
Depdc1bQ8BH88 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Depdc1bQ8BH88 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Depdc1bQ8BH88 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC16.58■□□□□ 0.24
Depdc1bQ8BH88 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC16.58■□□□□ 0.24
Depdc1bQ8BH88 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Depdc1bQ8BH88 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC16.58■□□□□ 0.24
Depdc1bQ8BH88 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Depdc1bQ8BH88 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Depdc1bQ8BH88 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Depdc1bQ8BH88 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Depdc1bQ8BH88 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Depdc1bQ8BH88 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Depdc1bQ8BH88 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Depdc1bQ8BH88 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Depdc1bQ8BH88 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Depdc1bQ8BH88 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC16.58■□□□□ 0.24
Depdc1bQ8BH88 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Depdc1bQ8BH88 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Depdc1bQ8BH88 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Depdc1bQ8BH88 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Depdc1bQ8BH88 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC16.57■□□□□ 0.24
Depdc1bQ8BH88 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Depdc1bQ8BH88 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Depdc1bQ8BH88 BC037039-201ENSMUST00000192003 2205 ntBASIC16.57■□□□□ 0.24
Depdc1bQ8BH88 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Depdc1bQ8BH88 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Depdc1bQ8BH88 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Depdc1bQ8BH88 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Depdc1bQ8BH88 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Depdc1bQ8BH88 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Depdc1bQ8BH88 Gm8344-201ENSMUST00000119813 856 ntBASIC16.57■□□□□ 0.24
Depdc1bQ8BH88 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC16.57■□□□□ 0.24
Depdc1bQ8BH88 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Depdc1bQ8BH88 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Depdc1bQ8BH88 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC16.57■□□□□ 0.24
Depdc1bQ8BH88 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC16.57■□□□□ 0.24
Depdc1bQ8BH88 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Depdc1bQ8BH88 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Depdc1bQ8BH88 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Depdc1bQ8BH88 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Depdc1bQ8BH88 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Depdc1bQ8BH88 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Depdc1bQ8BH88 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Depdc1bQ8BH88 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Depdc1bQ8BH88 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC16.56■□□□□ 0.24
Depdc1bQ8BH88 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Depdc1bQ8BH88 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Depdc1bQ8BH88 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Depdc1bQ8BH88 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
Depdc1bQ8BH88 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Depdc1bQ8BH88 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Depdc1bQ8BH88 Gm15173-201ENSMUST00000122049 433 ntBASIC16.56■□□□□ 0.24
Depdc1bQ8BH88 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC16.56■□□□□ 0.24
Depdc1bQ8BH88 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC16.56■□□□□ 0.24
Depdc1bQ8BH88 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Depdc1bQ8BH88 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC16.56■□□□□ 0.24
Depdc1bQ8BH88 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC16.56■□□□□ 0.24
Depdc1bQ8BH88 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Depdc1bQ8BH88 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Depdc1bQ8BH88 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Depdc1bQ8BH88 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC16.56■□□□□ 0.24
Depdc1bQ8BH88 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Depdc1bQ8BH88 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms