Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ubp1Q811S7 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC15.04■□□□□ -0
Ubp1Q811S7 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ubp1Q811S7 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Ubp1Q811S7 Gm27528-202ENSMUST00000222916 2012 ntBASIC15.04■□□□□ -0
Ubp1Q811S7 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC15.04■□□□□ -0
Ubp1Q811S7 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ubp1Q811S7 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ubp1Q811S7 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC15.04■□□□□ -0
Ubp1Q811S7 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC15.04■□□□□ -0
Ubp1Q811S7 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC15.04■□□□□ -0
Ubp1Q811S7 Gm5253-201ENSMUST00000187104 1025 ntBASIC15.04■□□□□ -0
Ubp1Q811S7 Gm44771-201ENSMUST00000206975 626 ntBASIC15.04■□□□□ -0
Ubp1Q811S7 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC15.04■□□□□ -0
Ubp1Q811S7 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Ubp1Q811S7 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC15.04■□□□□ -0
Ubp1Q811S7 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC15.04■□□□□ -0
Ubp1Q811S7 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC15.04■□□□□ -0
Ubp1Q811S7 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ubp1Q811S7 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ubp1Q811S7 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ubp1Q811S7 Gm9867-201ENSMUST00000192212 2647 ntBASIC15.04■□□□□ -0
Ubp1Q811S7 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ubp1Q811S7 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC15.04■□□□□ -0
Ubp1Q811S7 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ubp1Q811S7 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC15.04■□□□□ -0
Ubp1Q811S7 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ubp1Q811S7 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ubp1Q811S7 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC15.03■□□□□ -0
Ubp1Q811S7 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ubp1Q811S7 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Ubp1Q811S7 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ubp1Q811S7 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC15.03■□□□□ -0
Ubp1Q811S7 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ubp1Q811S7 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ubp1Q811S7 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC15.03■□□□□ -0
Ubp1Q811S7 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ubp1Q811S7 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ubp1Q811S7 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC15.03■□□□□ -0
Ubp1Q811S7 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ubp1Q811S7 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC15.03■□□□□ -0
Ubp1Q811S7 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ubp1Q811S7 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC15.03■□□□□ -0
Ubp1Q811S7 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC15.03■□□□□ -0
Ubp1Q811S7 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC15.03■□□□□ -0
Ubp1Q811S7 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Ubp1Q811S7 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC15.03■□□□□ -0
Ubp1Q811S7 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC15.03■□□□□ -0
Ubp1Q811S7 Gm27628-201ENSMUST00000184911 107 ntBASIC15.03■□□□□ -0
Ubp1Q811S7 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC15.03■□□□□ -0
Ubp1Q811S7 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC15.03■□□□□ -0
Ubp1Q811S7 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC15.03■□□□□ -0
Ubp1Q811S7 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ubp1Q811S7 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ubp1Q811S7 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Ubp1Q811S7 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ubp1Q811S7 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Ubp1Q811S7 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC15.03■□□□□ -0
Ubp1Q811S7 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC15.03■□□□□ -0
Ubp1Q811S7 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Ubp1Q811S7 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC15.03■□□□□ -0
Ubp1Q811S7 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ubp1Q811S7 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ubp1Q811S7 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Ubp1Q811S7 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ubp1Q811S7 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ubp1Q811S7 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC15.02■□□□□ -0
Ubp1Q811S7 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ubp1Q811S7 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ubp1Q811S7 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC15.02■□□□□ -0
Ubp1Q811S7 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC15.02■□□□□ -0
Ubp1Q811S7 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Ubp1Q811S7 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ubp1Q811S7 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC15.02■□□□□ -0
Ubp1Q811S7 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC15.02■□□□□ -0
Ubp1Q811S7 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC15.02■□□□□ -0
Ubp1Q811S7 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC15.02■□□□□ -0
Ubp1Q811S7 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC15.02■□□□□ -0
Ubp1Q811S7 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC15.02■□□□□ -0
Ubp1Q811S7 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC15.02■□□□□ -0
Ubp1Q811S7 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC15.02■□□□□ -0
Ubp1Q811S7 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC15.02■□□□□ -0
Ubp1Q811S7 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC15.02■□□□□ -0
Ubp1Q811S7 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Ubp1Q811S7 Gm8318-201ENSMUST00000182954 872 ntBASIC15.02■□□□□ -0
Ubp1Q811S7 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC15.02■□□□□ -0
Ubp1Q811S7 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ubp1Q811S7 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Ubp1Q811S7 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC15.02■□□□□ -0
Ubp1Q811S7 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ubp1Q811S7 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ubp1Q811S7 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ubp1Q811S7 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
Ubp1Q811S7 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ubp1Q811S7 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ubp1Q811S7 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Ubp1Q811S7 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ubp1Q811S7 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ubp1Q811S7 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Ubp1Q811S7 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms