Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC17.57■□□□□ 0.4
Prpf40bQ80W14 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Prpf40bQ80W14 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Prpf40bQ80W14 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Prpf40bQ80W14 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Prpf40bQ80W14 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Prpf40bQ80W14 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Prpf40bQ80W14 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC17.57■□□□□ 0.4
Prpf40bQ80W14 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC17.57■□□□□ 0.4
Prpf40bQ80W14 AC124732.2-201ENSMUST00000221977 316 ntBASIC17.57■□□□□ 0.4
Prpf40bQ80W14 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Prpf40bQ80W14 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Prpf40bQ80W14 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Prpf40bQ80W14 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Prpf40bQ80W14 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Prpf40bQ80W14 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC17.57■□□□□ 0.4
Prpf40bQ80W14 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Prpf40bQ80W14 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Prpf40bQ80W14 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
Prpf40bQ80W14 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Prpf40bQ80W14 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Prpf40bQ80W14 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
Prpf40bQ80W14 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Prpf40bQ80W14 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Prpf40bQ80W14 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC17.56■□□□□ 0.4
Prpf40bQ80W14 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Prpf40bQ80W14 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Prpf40bQ80W14 Best4-ps-201ENSMUST00000129783 1380 ntBASIC17.56■□□□□ 0.4
Prpf40bQ80W14 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Prpf40bQ80W14 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Prpf40bQ80W14 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Prpf40bQ80W14 AC132265.1-201ENSMUST00000219233 1665 ntBASIC17.56■□□□□ 0.4
Prpf40bQ80W14 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Prpf40bQ80W14 Gm27301-201ENSMUST00000184012 127 ntBASIC17.56■□□□□ 0.4
Prpf40bQ80W14 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC17.56■□□□□ 0.4
Prpf40bQ80W14 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Prpf40bQ80W14 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Prpf40bQ80W14 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Prpf40bQ80W14 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Prpf40bQ80W14 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Prpf40bQ80W14 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Prpf40bQ80W14 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Prpf40bQ80W14 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Prpf40bQ80W14 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Prpf40bQ80W14 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC17.56■□□□□ 0.4
Prpf40bQ80W14 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Prpf40bQ80W14 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Prpf40bQ80W14 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Prpf40bQ80W14 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Prpf40bQ80W14 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Prpf40bQ80W14 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
Prpf40bQ80W14 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Prpf40bQ80W14 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Prpf40bQ80W14 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Prpf40bQ80W14 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC17.56■□□□□ 0.4
Prpf40bQ80W14 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC17.56■□□□□ 0.4
Prpf40bQ80W14 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Prpf40bQ80W14 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Prpf40bQ80W14 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Prpf40bQ80W14 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Prpf40bQ80W14 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Prpf40bQ80W14 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Prpf40bQ80W14 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Prpf40bQ80W14 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Prpf40bQ80W14 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Prpf40bQ80W14 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC17.55■□□□□ 0.4
Prpf40bQ80W14 Gm6226-201ENSMUST00000117765 1146 ntBASIC17.55■□□□□ 0.4
Prpf40bQ80W14 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC17.55■□□□□ 0.4
Prpf40bQ80W14 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Prpf40bQ80W14 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Prpf40bQ80W14 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC17.55■□□□□ 0.4
Prpf40bQ80W14 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Prpf40bQ80W14 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Prpf40bQ80W14 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Prpf40bQ80W14 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC17.55■□□□□ 0.4
Prpf40bQ80W14 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Prpf40bQ80W14 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Prpf40bQ80W14 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Prpf40bQ80W14 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Prpf40bQ80W14 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC17.55■□□□□ 0.4
Prpf40bQ80W14 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
Prpf40bQ80W14 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC17.55■□□□□ 0.4
Prpf40bQ80W14 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Prpf40bQ80W14 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Prpf40bQ80W14 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Prpf40bQ80W14 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
Prpf40bQ80W14 Asic1-205ENSMUST00000228185 1818 ntBASIC17.54■□□□□ 0.4
Prpf40bQ80W14 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Prpf40bQ80W14 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Prpf40bQ80W14 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC17.54■□□□□ 0.4
Prpf40bQ80W14 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC17.54■□□□□ 0.4
Prpf40bQ80W14 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC17.54■□□□□ 0.4
Prpf40bQ80W14 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC17.54■□□□□ 0.4
Prpf40bQ80W14 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC17.54■□□□□ 0.4
Prpf40bQ80W14 Gm43767-201ENSMUST00000198933 381 ntBASIC17.54■□□□□ 0.4
Prpf40bQ80W14 AC093926.2-201ENSMUST00000214468 1228 ntBASIC17.54■□□□□ 0.4
Prpf40bQ80W14 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Prpf40bQ80W14 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Prpf40bQ80W14 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Prpf40bQ80W14 Hist1h2al-201ENSMUST00000091708 339 ntBASIC17.54■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms