Protein–RNA interactions for Protein: Q80VA5

Sh3tc2, SH3 domain and tetratricopeptide repeat-containing protein 2, mousemouse

Predictions only

Length 1,289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3tc2Q80VA5 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sh3tc2Q80VA5 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sh3tc2Q80VA5 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sh3tc2Q80VA5 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC16.59■□□□□ 0.25
Sh3tc2Q80VA5 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC16.59■□□□□ 0.25
Sh3tc2Q80VA5 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Sh3tc2Q80VA5 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Sh3tc2Q80VA5 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Sh3tc2Q80VA5 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Sh3tc2Q80VA5 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Sh3tc2Q80VA5 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Sh3tc2Q80VA5 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC16.59■□□□□ 0.25
Sh3tc2Q80VA5 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sh3tc2Q80VA5 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Sh3tc2Q80VA5 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sh3tc2Q80VA5 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC16.59■□□□□ 0.25
Sh3tc2Q80VA5 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sh3tc2Q80VA5 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Sh3tc2Q80VA5 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sh3tc2Q80VA5 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Sh3tc2Q80VA5 Rbfox2-206ENSMUST00000227314 1810 ntBASIC16.59■□□□□ 0.25
Sh3tc2Q80VA5 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sh3tc2Q80VA5 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC16.58■□□□□ 0.25
Sh3tc2Q80VA5 AC133083.1-201ENSMUST00000221736 2209 ntBASIC16.58■□□□□ 0.25
Sh3tc2Q80VA5 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Sh3tc2Q80VA5 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Sh3tc2Q80VA5 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.24
Sh3tc2Q80VA5 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC16.58■□□□□ 0.24
Sh3tc2Q80VA5 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC16.58■□□□□ 0.24
Sh3tc2Q80VA5 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Sh3tc2Q80VA5 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC16.58■□□□□ 0.24
Sh3tc2Q80VA5 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC16.58■□□□□ 0.24
Sh3tc2Q80VA5 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC16.58■□□□□ 0.24
Sh3tc2Q80VA5 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Sh3tc2Q80VA5 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Sh3tc2Q80VA5 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
Sh3tc2Q80VA5 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Sh3tc2Q80VA5 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Sh3tc2Q80VA5 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Sh3tc2Q80VA5 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC16.58■□□□□ 0.24
Sh3tc2Q80VA5 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Sh3tc2Q80VA5 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Sh3tc2Q80VA5 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC16.58■□□□□ 0.24
Sh3tc2Q80VA5 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Sh3tc2Q80VA5 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
Sh3tc2Q80VA5 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sh3tc2Q80VA5 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sh3tc2Q80VA5 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sh3tc2Q80VA5 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sh3tc2Q80VA5 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Sh3tc2Q80VA5 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Sh3tc2Q80VA5 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sh3tc2Q80VA5 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sh3tc2Q80VA5 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sh3tc2Q80VA5 AC119177.1-201ENSMUST00000227647 1332 ntBASIC16.57■□□□□ 0.24
Sh3tc2Q80VA5 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC16.57■□□□□ 0.24
Sh3tc2Q80VA5 Gm6257-201ENSMUST00000163864 910 ntBASIC16.57■□□□□ 0.24
Sh3tc2Q80VA5 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Sh3tc2Q80VA5 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC16.57■□□□□ 0.24
Sh3tc2Q80VA5 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC16.57■□□□□ 0.24
Sh3tc2Q80VA5 Gm18246-201ENSMUST00000221023 728 ntBASIC16.57■□□□□ 0.24
Sh3tc2Q80VA5 AC124732.2-201ENSMUST00000221977 316 ntBASIC16.57■□□□□ 0.24
Sh3tc2Q80VA5 CT025535.1-201ENSMUST00000227172 491 ntBASIC16.57■□□□□ 0.24
Sh3tc2Q80VA5 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sh3tc2Q80VA5 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Sh3tc2Q80VA5 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sh3tc2Q80VA5 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sh3tc2Q80VA5 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sh3tc2Q80VA5 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Sh3tc2Q80VA5 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sh3tc2Q80VA5 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
Sh3tc2Q80VA5 Gm44729-201ENSMUST00000206759 2052 ntBASIC16.57■□□□□ 0.24
Sh3tc2Q80VA5 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sh3tc2Q80VA5 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sh3tc2Q80VA5 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sh3tc2Q80VA5 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sh3tc2Q80VA5 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sh3tc2Q80VA5 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sh3tc2Q80VA5 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sh3tc2Q80VA5 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sh3tc2Q80VA5 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
Sh3tc2Q80VA5 AC157650.3-201ENSMUST00000225058 1476 ntBASIC16.56■□□□□ 0.24
Sh3tc2Q80VA5 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Sh3tc2Q80VA5 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Sh3tc2Q80VA5 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sh3tc2Q80VA5 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC16.56■□□□□ 0.24
Sh3tc2Q80VA5 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sh3tc2Q80VA5 Mir449b-201ENSMUST00000104833 80 ntBASIC16.56■□□□□ 0.24
Sh3tc2Q80VA5 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
Sh3tc2Q80VA5 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Sh3tc2Q80VA5 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC16.56■□□□□ 0.24
Sh3tc2Q80VA5 Gm5745-201ENSMUST00000183748 313 ntBASIC16.56■□□□□ 0.24
Sh3tc2Q80VA5 Gpr146-202ENSMUST00000053120 1040 ntBASIC16.56■□□□□ 0.24
Sh3tc2Q80VA5 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Sh3tc2Q80VA5 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sh3tc2Q80VA5 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
Sh3tc2Q80VA5 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC16.56■□□□□ 0.24
Sh3tc2Q80VA5 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sh3tc2Q80VA5 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sh3tc2Q80VA5 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms