Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdh19Q80TF3 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC14.96□□□□□ -0.01
Pcdh19Q80TF3 Gm24245-201ENSMUST00000157318 57 ntBASIC14.96□□□□□ -0.01
Pcdh19Q80TF3 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Pcdh19Q80TF3 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC14.96□□□□□ -0.01
Pcdh19Q80TF3 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Pcdh19Q80TF3 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdh19Q80TF3 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdh19Q80TF3 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdh19Q80TF3 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdh19Q80TF3 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.02
Pcdh19Q80TF3 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC14.96□□□□□ -0.02
Pcdh19Q80TF3 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Pcdh19Q80TF3 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Pcdh19Q80TF3 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Pcdh19Q80TF3 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Pcdh19Q80TF3 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Pcdh19Q80TF3 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.02
Pcdh19Q80TF3 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdh19Q80TF3 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdh19Q80TF3 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdh19Q80TF3 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdh19Q80TF3 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Pcdh19Q80TF3 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdh19Q80TF3 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdh19Q80TF3 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdh19Q80TF3 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC14.95□□□□□ -0.02
Pcdh19Q80TF3 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdh19Q80TF3 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
Pcdh19Q80TF3 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdh19Q80TF3 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Pcdh19Q80TF3 Gm26308-201ENSMUST00000157768 69 ntBASIC14.95□□□□□ -0.02
Pcdh19Q80TF3 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC14.95□□□□□ -0.02
Pcdh19Q80TF3 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Pcdh19Q80TF3 Gm5177-201ENSMUST00000183092 997 ntBASIC14.95□□□□□ -0.02
Pcdh19Q80TF3 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC14.95□□□□□ -0.02
Pcdh19Q80TF3 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Pcdh19Q80TF3 Gm7556-201ENSMUST00000201178 1084 ntBASIC14.95□□□□□ -0.02
Pcdh19Q80TF3 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdh19Q80TF3 Thap2-203ENSMUST00000218989 527 ntBASIC14.95□□□□□ -0.02
Pcdh19Q80TF3 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdh19Q80TF3 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Pcdh19Q80TF3 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdh19Q80TF3 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Pcdh19Q80TF3 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Pcdh19Q80TF3 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC14.95□□□□□ -0.02
Pcdh19Q80TF3 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC14.95□□□□□ -0.02
Pcdh19Q80TF3 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdh19Q80TF3 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Pcdh19Q80TF3 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdh19Q80TF3 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdh19Q80TF3 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Pcdh19Q80TF3 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdh19Q80TF3 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdh19Q80TF3 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdh19Q80TF3 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdh19Q80TF3 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdh19Q80TF3 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdh19Q80TF3 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdh19Q80TF3 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC14.94□□□□□ -0.02
Pcdh19Q80TF3 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC14.94□□□□□ -0.02
Pcdh19Q80TF3 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC14.94□□□□□ -0.02
Pcdh19Q80TF3 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdh19Q80TF3 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC14.94□□□□□ -0.02
Pcdh19Q80TF3 AC151286.1-201ENSMUST00000198489 145 ntBASIC14.94□□□□□ -0.02
Pcdh19Q80TF3 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Pcdh19Q80TF3 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdh19Q80TF3 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdh19Q80TF3 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdh19Q80TF3 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdh19Q80TF3 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdh19Q80TF3 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC14.94□□□□□ -0.02
Pcdh19Q80TF3 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdh19Q80TF3 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Pcdh19Q80TF3 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdh19Q80TF3 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdh19Q80TF3 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Pcdh19Q80TF3 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdh19Q80TF3 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdh19Q80TF3 AC069562.2-201ENSMUST00000224644 2146 ntBASIC14.93□□□□□ -0.02
Pcdh19Q80TF3 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdh19Q80TF3 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdh19Q80TF3 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdh19Q80TF3 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdh19Q80TF3 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdh19Q80TF3 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdh19Q80TF3 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC14.93□□□□□ -0.02
Pcdh19Q80TF3 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC14.93□□□□□ -0.02
Pcdh19Q80TF3 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Pcdh19Q80TF3 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdh19Q80TF3 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdh19Q80TF3 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdh19Q80TF3 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdh19Q80TF3 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC14.93□□□□□ -0.02
Pcdh19Q80TF3 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdh19Q80TF3 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdh19Q80TF3 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Pcdh19Q80TF3 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdh19Q80TF3 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdh19Q80TF3 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms