Protein–RNA interactions for Protein: Q7TPQ3

Shprh, E3 ubiquitin-protein ligase SHPRH, mousemouse

Predictions only

Length 1,674 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShprhQ7TPQ3 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
ShprhQ7TPQ3 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC21.31■■□□□ 1
ShprhQ7TPQ3 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC21.31■■□□□ 1
ShprhQ7TPQ3 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC21.31■■□□□ 1
ShprhQ7TPQ3 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC21.31■■□□□ 1
ShprhQ7TPQ3 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC21.31■■□□□ 1
ShprhQ7TPQ3 Cdk7-205ENSMUST00000225990 1159 ntBASIC21.31■■□□□ 1
ShprhQ7TPQ3 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
ShprhQ7TPQ3 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC21.3■■□□□ 1
ShprhQ7TPQ3 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
ShprhQ7TPQ3 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC21.3■■□□□ 1
ShprhQ7TPQ3 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
ShprhQ7TPQ3 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
ShprhQ7TPQ3 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC21.3■■□□□ 1
ShprhQ7TPQ3 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC21.3■■□□□ 1
ShprhQ7TPQ3 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC21.3■■□□□ 1
ShprhQ7TPQ3 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC21.3■■□□□ 1
ShprhQ7TPQ3 Gm9522-201ENSMUST00000182394 926 ntBASIC21.3■■□□□ 1
ShprhQ7TPQ3 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC21.3■■□□□ 1
ShprhQ7TPQ3 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
ShprhQ7TPQ3 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
ShprhQ7TPQ3 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC21.29■■□□□ 1
ShprhQ7TPQ3 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
ShprhQ7TPQ3 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
ShprhQ7TPQ3 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC21.29■■□□□ 1
ShprhQ7TPQ3 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
ShprhQ7TPQ3 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
ShprhQ7TPQ3 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC21.29■■□□□ 1
ShprhQ7TPQ3 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
ShprhQ7TPQ3 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
ShprhQ7TPQ3 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
ShprhQ7TPQ3 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
ShprhQ7TPQ3 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC21.29■■□□□ 1
ShprhQ7TPQ3 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC21.28■■□□□ 1
ShprhQ7TPQ3 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
ShprhQ7TPQ3 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC21.28■■□□□ 1
ShprhQ7TPQ3 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC21.28■■□□□ 1
ShprhQ7TPQ3 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC21.28■■□□□ 1
ShprhQ7TPQ3 AC154239.3-201ENSMUST00000226933 674 ntBASIC21.28■■□□□ 1
ShprhQ7TPQ3 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC21.28■■□□□ 1
ShprhQ7TPQ3 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
ShprhQ7TPQ3 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
ShprhQ7TPQ3 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
ShprhQ7TPQ3 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC21.28■■□□□ 1
ShprhQ7TPQ3 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
ShprhQ7TPQ3 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC21.28■■□□□ 1
ShprhQ7TPQ3 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
ShprhQ7TPQ3 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
ShprhQ7TPQ3 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
ShprhQ7TPQ3 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC21.28■■□□□ 1
ShprhQ7TPQ3 Gm20445-201ENSMUST00000061905 565 ntBASIC21.28■■□□□ 1
ShprhQ7TPQ3 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
ShprhQ7TPQ3 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
ShprhQ7TPQ3 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
ShprhQ7TPQ3 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
ShprhQ7TPQ3 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC21.27■■□□□ 1
ShprhQ7TPQ3 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
ShprhQ7TPQ3 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
ShprhQ7TPQ3 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
ShprhQ7TPQ3 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
ShprhQ7TPQ3 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC21.27■■□□□ 1
ShprhQ7TPQ3 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
ShprhQ7TPQ3 Gm9229-201ENSMUST00000222777 126 ntBASIC21.27■■□□□ 1
ShprhQ7TPQ3 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC21.27■■□□□ 1
ShprhQ7TPQ3 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
ShprhQ7TPQ3 Gm15222-202ENSMUST00000228667 1726 ntBASIC21.27■■□□□ 1
ShprhQ7TPQ3 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC21.27■□□□□ 0.99
ShprhQ7TPQ3 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC21.27■□□□□ 0.99
ShprhQ7TPQ3 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
ShprhQ7TPQ3 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
ShprhQ7TPQ3 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
ShprhQ7TPQ3 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
ShprhQ7TPQ3 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
ShprhQ7TPQ3 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
ShprhQ7TPQ3 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC21.26■□□□□ 0.99
ShprhQ7TPQ3 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC21.26■□□□□ 0.99
ShprhQ7TPQ3 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
ShprhQ7TPQ3 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC21.26■□□□□ 0.99
ShprhQ7TPQ3 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
ShprhQ7TPQ3 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
ShprhQ7TPQ3 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
ShprhQ7TPQ3 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
ShprhQ7TPQ3 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
ShprhQ7TPQ3 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC21.25■□□□□ 0.99
ShprhQ7TPQ3 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC21.25■□□□□ 0.99
ShprhQ7TPQ3 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC21.25■□□□□ 0.99
ShprhQ7TPQ3 Gm23984-201ENSMUST00000157139 203 ntBASIC21.25■□□□□ 0.99
ShprhQ7TPQ3 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
ShprhQ7TPQ3 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC21.25■□□□□ 0.99
ShprhQ7TPQ3 AC132467.2-202ENSMUST00000227726 559 ntBASIC21.25■□□□□ 0.99
ShprhQ7TPQ3 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
ShprhQ7TPQ3 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
ShprhQ7TPQ3 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
ShprhQ7TPQ3 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
ShprhQ7TPQ3 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
ShprhQ7TPQ3 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
ShprhQ7TPQ3 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC21.25■□□□□ 0.99
ShprhQ7TPQ3 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC21.25■□□□□ 0.99
ShprhQ7TPQ3 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
ShprhQ7TPQ3 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms