Protein–RNA interactions for Protein: Q70E20

Sned1, Sushi, nidogen and EGF-like domain-containing protein 1, mousemouse

Predictions only

Length 1,403 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sned1Q70E20 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sned1Q70E20 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sned1Q70E20 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Sned1Q70E20 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sned1Q70E20 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sned1Q70E20 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sned1Q70E20 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sned1Q70E20 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sned1Q70E20 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC18.15■□□□□ 0.5
Sned1Q70E20 Gm13392-201ENSMUST00000117708 150 ntBASIC18.15■□□□□ 0.5
Sned1Q70E20 Gm13464-201ENSMUST00000119418 935 ntBASIC18.15■□□□□ 0.5
Sned1Q70E20 Gm12341-201ENSMUST00000119724 503 ntBASIC18.15■□□□□ 0.5
Sned1Q70E20 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Sned1Q70E20 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Sned1Q70E20 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Sned1Q70E20 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Sned1Q70E20 Mir125a-201ENSMUST00000083545 68 ntBASIC18.15■□□□□ 0.5
Sned1Q70E20 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Sned1Q70E20 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sned1Q70E20 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sned1Q70E20 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sned1Q70E20 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sned1Q70E20 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Sned1Q70E20 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sned1Q70E20 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sned1Q70E20 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sned1Q70E20 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sned1Q70E20 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sned1Q70E20 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sned1Q70E20 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sned1Q70E20 Celf4-206ENSMUST00000224553 1729 ntBASIC18.15■□□□□ 0.5
Sned1Q70E20 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sned1Q70E20 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sned1Q70E20 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC18.15■□□□□ 0.5
Sned1Q70E20 Gm27892-201ENSMUST00000185017 106 ntBASIC18.15■□□□□ 0.5
Sned1Q70E20 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC18.15■□□□□ 0.5
Sned1Q70E20 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sned1Q70E20 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Sned1Q70E20 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.5
Sned1Q70E20 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Sned1Q70E20 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.49
Sned1Q70E20 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Sned1Q70E20 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Sned1Q70E20 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
Sned1Q70E20 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Sned1Q70E20 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Sned1Q70E20 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Sned1Q70E20 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Sned1Q70E20 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Sned1Q70E20 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Sned1Q70E20 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Sned1Q70E20 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC18.14■□□□□ 0.49
Sned1Q70E20 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Sned1Q70E20 Gm7558-201ENSMUST00000193221 1165 ntBASIC18.14■□□□□ 0.49
Sned1Q70E20 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Sned1Q70E20 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Sned1Q70E20 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Sned1Q70E20 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sned1Q70E20 Gm26596-201ENSMUST00000180464 2655 ntBASIC18.13■□□□□ 0.49
Sned1Q70E20 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sned1Q70E20 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sned1Q70E20 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sned1Q70E20 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sned1Q70E20 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sned1Q70E20 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sned1Q70E20 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sned1Q70E20 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Sned1Q70E20 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sned1Q70E20 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Sned1Q70E20 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Sned1Q70E20 Gm5354-201ENSMUST00000182417 973 ntBASIC18.13■□□□□ 0.49
Sned1Q70E20 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC18.13■□□□□ 0.49
Sned1Q70E20 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC18.13■□□□□ 0.49
Sned1Q70E20 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sned1Q70E20 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sned1Q70E20 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sned1Q70E20 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sned1Q70E20 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sned1Q70E20 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC18.12■□□□□ 0.49
Sned1Q70E20 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC18.12■□□□□ 0.49
Sned1Q70E20 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sned1Q70E20 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sned1Q70E20 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Sned1Q70E20 Gm13226-201ENSMUST00000117838 404 ntBASIC18.12■□□□□ 0.49
Sned1Q70E20 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sned1Q70E20 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sned1Q70E20 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC18.12■□□□□ 0.49
Sned1Q70E20 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC18.12■□□□□ 0.49
Sned1Q70E20 AC139580.1-202ENSMUST00000223574 928 ntBASIC18.12■□□□□ 0.49
Sned1Q70E20 AC150560.1-201ENSMUST00000227731 1187 ntBASIC18.12■□□□□ 0.49
Sned1Q70E20 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sned1Q70E20 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
Sned1Q70E20 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sned1Q70E20 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sned1Q70E20 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sned1Q70E20 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sned1Q70E20 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sned1Q70E20 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Sned1Q70E20 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC18.11■□□□□ 0.49
Sned1Q70E20 Tfap2a-203ENSMUST00000223869 2037 ntBASIC18.11■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 66.3 ms