Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC13.37□□□□□ -0.27
Snrnp40Q6PE01 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Snrnp40Q6PE01 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Snrnp40Q6PE01 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC13.36□□□□□ -0.27
Snrnp40Q6PE01 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
Snrnp40Q6PE01 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Snrnp40Q6PE01 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Snrnp40Q6PE01 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Snrnp40Q6PE01 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Snrnp40Q6PE01 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Snrnp40Q6PE01 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Snrnp40Q6PE01 Gm15635-204ENSMUST00000208024 2539 ntBASIC13.36□□□□□ -0.27
Snrnp40Q6PE01 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC13.36□□□□□ -0.27
Snrnp40Q6PE01 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Snrnp40Q6PE01 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Snrnp40Q6PE01 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Snrnp40Q6PE01 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Snrnp40Q6PE01 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Snrnp40Q6PE01 Gm7488-201ENSMUST00000117148 684 ntBASIC13.36□□□□□ -0.27
Snrnp40Q6PE01 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Snrnp40Q6PE01 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Snrnp40Q6PE01 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
Snrnp40Q6PE01 Gm28630-201ENSMUST00000187806 498 ntBASIC13.36□□□□□ -0.27
Snrnp40Q6PE01 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Snrnp40Q6PE01 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Snrnp40Q6PE01 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Snrnp40Q6PE01 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Snrnp40Q6PE01 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Snrnp40Q6PE01 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Snrnp40Q6PE01 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Snrnp40Q6PE01 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Snrnp40Q6PE01 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Snrnp40Q6PE01 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Snrnp40Q6PE01 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Snrnp40Q6PE01 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC13.36□□□□□ -0.27
Snrnp40Q6PE01 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Snrnp40Q6PE01 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Snrnp40Q6PE01 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Snrnp40Q6PE01 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Snrnp40Q6PE01 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Snrnp40Q6PE01 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC13.35□□□□□ -0.27
Snrnp40Q6PE01 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Snrnp40Q6PE01 Gm5898-201ENSMUST00000121016 2071 ntBASIC13.35□□□□□ -0.27
Snrnp40Q6PE01 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC13.35□□□□□ -0.27
Snrnp40Q6PE01 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Snrnp40Q6PE01 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Snrnp40Q6PE01 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
Snrnp40Q6PE01 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Snrnp40Q6PE01 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Snrnp40Q6PE01 Gm14767-201ENSMUST00000121559 586 ntBASIC13.35□□□□□ -0.27
Snrnp40Q6PE01 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC13.35□□□□□ -0.27
Snrnp40Q6PE01 Gm16215-201ENSMUST00000161990 637 ntBASIC13.35□□□□□ -0.27
Snrnp40Q6PE01 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Snrnp40Q6PE01 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Snrnp40Q6PE01 Gm27920-201ENSMUST00000183953 96 ntBASIC13.35□□□□□ -0.27
Snrnp40Q6PE01 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC13.35□□□□□ -0.27
Snrnp40Q6PE01 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Snrnp40Q6PE01 AC135669.1-201ENSMUST00000213585 412 ntBASIC13.35□□□□□ -0.27
Snrnp40Q6PE01 Gm9063-201ENSMUST00000223299 582 ntBASIC13.35□□□□□ -0.27
Snrnp40Q6PE01 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Snrnp40Q6PE01 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Snrnp40Q6PE01 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Snrnp40Q6PE01 Gm13233-201ENSMUST00000118760 1443 ntBASIC13.35□□□□□ -0.27
Snrnp40Q6PE01 Gm13244-201ENSMUST00000118855 1446 ntBASIC13.35□□□□□ -0.27
Snrnp40Q6PE01 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Snrnp40Q6PE01 Syt7-205ENSMUST00000224135 1557 ntBASIC13.35□□□□□ -0.27
Snrnp40Q6PE01 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Snrnp40Q6PE01 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Snrnp40Q6PE01 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Snrnp40Q6PE01 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Snrnp40Q6PE01 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Snrnp40Q6PE01 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Snrnp40Q6PE01 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Snrnp40Q6PE01 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Snrnp40Q6PE01 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Snrnp40Q6PE01 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Snrnp40Q6PE01 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Snrnp40Q6PE01 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC13.34□□□□□ -0.27
Snrnp40Q6PE01 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Snrnp40Q6PE01 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Snrnp40Q6PE01 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Snrnp40Q6PE01 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Snrnp40Q6PE01 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Snrnp40Q6PE01 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Snrnp40Q6PE01 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Snrnp40Q6PE01 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Snrnp40Q6PE01 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Snrnp40Q6PE01 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Snrnp40Q6PE01 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Snrnp40Q6PE01 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Snrnp40Q6PE01 Gm14127-201ENSMUST00000117906 678 ntBASIC13.34□□□□□ -0.27
Snrnp40Q6PE01 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC13.34□□□□□ -0.27
Snrnp40Q6PE01 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC13.34□□□□□ -0.27
Snrnp40Q6PE01 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Snrnp40Q6PE01 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Snrnp40Q6PE01 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Snrnp40Q6PE01 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Snrnp40Q6PE01 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Snrnp40Q6PE01 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Snrnp40Q6PE01 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms