Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Chd4Q6PDQ2 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Chd4Q6PDQ2 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Chd4Q6PDQ2 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Chd4Q6PDQ2 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Chd4Q6PDQ2 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Chd4Q6PDQ2 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Chd4Q6PDQ2 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC19.67■□□□□ 0.74
Chd4Q6PDQ2 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Chd4Q6PDQ2 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Chd4Q6PDQ2 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Chd4Q6PDQ2 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Chd4Q6PDQ2 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Chd4Q6PDQ2 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
Chd4Q6PDQ2 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC19.66■□□□□ 0.74
Chd4Q6PDQ2 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Chd4Q6PDQ2 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Chd4Q6PDQ2 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Chd4Q6PDQ2 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Chd4Q6PDQ2 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Chd4Q6PDQ2 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Chd4Q6PDQ2 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Chd4Q6PDQ2 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Chd4Q6PDQ2 Prob1-201ENSMUST00000097619 3021 ntBASIC19.66■□□□□ 0.74
Chd4Q6PDQ2 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Chd4Q6PDQ2 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC19.66■□□□□ 0.74
Chd4Q6PDQ2 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Chd4Q6PDQ2 Gm29667-201ENSMUST00000190817 490 ntBASIC19.66■□□□□ 0.74
Chd4Q6PDQ2 AC124732.1-201ENSMUST00000221551 910 ntBASIC19.66■□□□□ 0.74
Chd4Q6PDQ2 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Chd4Q6PDQ2 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Chd4Q6PDQ2 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Chd4Q6PDQ2 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Chd4Q6PDQ2 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Chd4Q6PDQ2 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Chd4Q6PDQ2 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Chd4Q6PDQ2 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Chd4Q6PDQ2 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Chd4Q6PDQ2 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Chd4Q6PDQ2 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Chd4Q6PDQ2 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC19.65■□□□□ 0.74
Chd4Q6PDQ2 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC19.65■□□□□ 0.74
Chd4Q6PDQ2 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC19.65■□□□□ 0.74
Chd4Q6PDQ2 Gm37230-201ENSMUST00000194491 818 ntBASIC19.65■□□□□ 0.74
Chd4Q6PDQ2 Gtpbp10-211ENSMUST00000198799 648 ntBASIC19.65■□□□□ 0.74
Chd4Q6PDQ2 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Chd4Q6PDQ2 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
Chd4Q6PDQ2 Tfap2a-203ENSMUST00000223869 2037 ntBASIC19.65■□□□□ 0.74
Chd4Q6PDQ2 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Chd4Q6PDQ2 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Chd4Q6PDQ2 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Chd4Q6PDQ2 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Chd4Q6PDQ2 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Chd4Q6PDQ2 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Chd4Q6PDQ2 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Chd4Q6PDQ2 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
Chd4Q6PDQ2 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC19.64■□□□□ 0.74
Chd4Q6PDQ2 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC19.64■□□□□ 0.74
Chd4Q6PDQ2 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
Chd4Q6PDQ2 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Chd4Q6PDQ2 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Chd4Q6PDQ2 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Chd4Q6PDQ2 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Chd4Q6PDQ2 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Chd4Q6PDQ2 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Chd4Q6PDQ2 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Chd4Q6PDQ2 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Chd4Q6PDQ2 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Chd4Q6PDQ2 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Chd4Q6PDQ2 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Chd4Q6PDQ2 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
Chd4Q6PDQ2 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
Chd4Q6PDQ2 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Chd4Q6PDQ2 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Chd4Q6PDQ2 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Chd4Q6PDQ2 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC19.63■□□□□ 0.73
Chd4Q6PDQ2 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Chd4Q6PDQ2 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
Chd4Q6PDQ2 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC19.63■□□□□ 0.73
Chd4Q6PDQ2 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Chd4Q6PDQ2 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Chd4Q6PDQ2 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Chd4Q6PDQ2 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Chd4Q6PDQ2 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Chd4Q6PDQ2 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC19.63■□□□□ 0.73
Chd4Q6PDQ2 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Chd4Q6PDQ2 Gm16215-201ENSMUST00000161990 637 ntBASIC19.63■□□□□ 0.73
Chd4Q6PDQ2 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Chd4Q6PDQ2 Gm27631-201ENSMUST00000184163 466 ntBASIC19.63■□□□□ 0.73
Chd4Q6PDQ2 Gm27989-201ENSMUST00000184721 107 ntBASIC19.63■□□□□ 0.73
Chd4Q6PDQ2 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC19.63■□□□□ 0.73
Chd4Q6PDQ2 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Chd4Q6PDQ2 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Chd4Q6PDQ2 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Chd4Q6PDQ2 Asic1-205ENSMUST00000228185 1818 ntBASIC19.62■□□□□ 0.73
Chd4Q6PDQ2 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Chd4Q6PDQ2 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Chd4Q6PDQ2 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Chd4Q6PDQ2 Hivep3-201ENSMUST00000084306 2973 ntBASIC19.62■□□□□ 0.73
Chd4Q6PDQ2 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms