Protein–RNA interactions for Protein: Q6NVF9

Cpsf6, Cleavage and polyadenylation specificity factor subunit 6, mousemouse

Known RBP Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf6Q6NVF9 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cpsf6Q6NVF9 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cpsf6Q6NVF9 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Cpsf6Q6NVF9 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cpsf6Q6NVF9 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cpsf6Q6NVF9 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cpsf6Q6NVF9 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Cpsf6Q6NVF9 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC14.8□□□□□ -0.04
Cpsf6Q6NVF9 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cpsf6Q6NVF9 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cpsf6Q6NVF9 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cpsf6Q6NVF9 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cpsf6Q6NVF9 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cpsf6Q6NVF9 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cpsf6Q6NVF9 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Cpsf6Q6NVF9 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cpsf6Q6NVF9 Gm15358-201ENSMUST00000119249 520 ntBASIC14.8□□□□□ -0.04
Cpsf6Q6NVF9 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC14.8□□□□□ -0.04
Cpsf6Q6NVF9 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Cpsf6Q6NVF9 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC14.8□□□□□ -0.04
Cpsf6Q6NVF9 Gm13830-205ENSMUST00000201195 1155 ntBASIC14.8□□□□□ -0.04
Cpsf6Q6NVF9 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Cpsf6Q6NVF9 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cpsf6Q6NVF9 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cpsf6Q6NVF9 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
Cpsf6Q6NVF9 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cpsf6Q6NVF9 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC14.8□□□□□ -0.04
Cpsf6Q6NVF9 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cpsf6Q6NVF9 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cpsf6Q6NVF9 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cpsf6Q6NVF9 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC14.8□□□□□ -0.04
Cpsf6Q6NVF9 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cpsf6Q6NVF9 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cpsf6Q6NVF9 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Cpsf6Q6NVF9 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Cpsf6Q6NVF9 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cpsf6Q6NVF9 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cpsf6Q6NVF9 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cpsf6Q6NVF9 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cpsf6Q6NVF9 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cpsf6Q6NVF9 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
Cpsf6Q6NVF9 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cpsf6Q6NVF9 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Cpsf6Q6NVF9 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Cpsf6Q6NVF9 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
Cpsf6Q6NVF9 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Cpsf6Q6NVF9 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cpsf6Q6NVF9 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cpsf6Q6NVF9 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cpsf6Q6NVF9 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cpsf6Q6NVF9 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cpsf6Q6NVF9 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Cpsf6Q6NVF9 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cpsf6Q6NVF9 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Cpsf6Q6NVF9 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Cpsf6Q6NVF9 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC14.79□□□□□ -0.04
Cpsf6Q6NVF9 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Cpsf6Q6NVF9 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Cpsf6Q6NVF9 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cpsf6Q6NVF9 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Cpsf6Q6NVF9 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Cpsf6Q6NVF9 AC122024.2-201ENSMUST00000220086 871 ntBASIC14.79□□□□□ -0.04
Cpsf6Q6NVF9 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cpsf6Q6NVF9 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cpsf6Q6NVF9 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cpsf6Q6NVF9 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Cpsf6Q6NVF9 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cpsf6Q6NVF9 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cpsf6Q6NVF9 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cpsf6Q6NVF9 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Cpsf6Q6NVF9 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cpsf6Q6NVF9 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC14.78□□□□□ -0.04
Cpsf6Q6NVF9 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cpsf6Q6NVF9 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cpsf6Q6NVF9 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
Cpsf6Q6NVF9 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cpsf6Q6NVF9 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Cpsf6Q6NVF9 Gm9103-201ENSMUST00000119371 405 ntBASIC14.78□□□□□ -0.04
Cpsf6Q6NVF9 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cpsf6Q6NVF9 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC14.78□□□□□ -0.04
Cpsf6Q6NVF9 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Cpsf6Q6NVF9 Gm37584-201ENSMUST00000193595 1290 ntBASIC14.78□□□□□ -0.04
Cpsf6Q6NVF9 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC14.78□□□□□ -0.04
Cpsf6Q6NVF9 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC14.78□□□□□ -0.04
Cpsf6Q6NVF9 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cpsf6Q6NVF9 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cpsf6Q6NVF9 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
Cpsf6Q6NVF9 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Cpsf6Q6NVF9 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cpsf6Q6NVF9 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Cpsf6Q6NVF9 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cpsf6Q6NVF9 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Cpsf6Q6NVF9 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cpsf6Q6NVF9 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Cpsf6Q6NVF9 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC14.78□□□□□ -0.04
Cpsf6Q6NVF9 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cpsf6Q6NVF9 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC14.78□□□□□ -0.04
Cpsf6Q6NVF9 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cpsf6Q6NVF9 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Cpsf6Q6NVF9 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms