Protein–RNA interactions for Protein: Q66PY1

Scube3, Signal peptide, CUB and EGF-like domain-containing protein 3, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube3Q66PY1 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC16■□□□□ 0.15
Scube3Q66PY1 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Scube3Q66PY1 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC16■□□□□ 0.15
Scube3Q66PY1 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Scube3Q66PY1 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC16■□□□□ 0.15
Scube3Q66PY1 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Scube3Q66PY1 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Scube3Q66PY1 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Scube3Q66PY1 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Scube3Q66PY1 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Scube3Q66PY1 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Scube3Q66PY1 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC16■□□□□ 0.15
Scube3Q66PY1 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Scube3Q66PY1 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Scube3Q66PY1 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Scube3Q66PY1 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Scube3Q66PY1 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Scube3Q66PY1 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Scube3Q66PY1 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Scube3Q66PY1 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Scube3Q66PY1 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Scube3Q66PY1 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Scube3Q66PY1 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Scube3Q66PY1 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Scube3Q66PY1 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Scube3Q66PY1 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Scube3Q66PY1 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC15.99■□□□□ 0.15
Scube3Q66PY1 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Scube3Q66PY1 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Scube3Q66PY1 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Scube3Q66PY1 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
Scube3Q66PY1 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Scube3Q66PY1 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC15.99■□□□□ 0.15
Scube3Q66PY1 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Scube3Q66PY1 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Scube3Q66PY1 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC15.99■□□□□ 0.15
Scube3Q66PY1 Gm44044-201ENSMUST00000205178 1089 ntBASIC15.99■□□□□ 0.15
Scube3Q66PY1 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Scube3Q66PY1 AC090659.1-201ENSMUST00000224334 768 ntBASIC15.99■□□□□ 0.15
Scube3Q66PY1 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Scube3Q66PY1 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
Scube3Q66PY1 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Scube3Q66PY1 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Scube3Q66PY1 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Scube3Q66PY1 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC15.99■□□□□ 0.15
Scube3Q66PY1 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Scube3Q66PY1 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Scube3Q66PY1 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Scube3Q66PY1 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Scube3Q66PY1 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC15.99■□□□□ 0.15
Scube3Q66PY1 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Scube3Q66PY1 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Scube3Q66PY1 4930433J02Rik-201ENSMUST00000194719 1386 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Scube3Q66PY1 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Scube3Q66PY1 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC15.99■□□□□ 0.15
Scube3Q66PY1 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Scube3Q66PY1 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Scube3Q66PY1 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Scube3Q66PY1 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Scube3Q66PY1 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Scube3Q66PY1 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Scube3Q66PY1 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Scube3Q66PY1 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Scube3Q66PY1 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC15.98■□□□□ 0.15
Scube3Q66PY1 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC15.98■□□□□ 0.15
Scube3Q66PY1 Gm13597-201ENSMUST00000121239 375 ntBASIC15.98■□□□□ 0.15
Scube3Q66PY1 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC15.98■□□□□ 0.15
Scube3Q66PY1 Gm29361-201ENSMUST00000183323 2000 ntBASIC15.98■□□□□ 0.15
Scube3Q66PY1 Gm8369-204ENSMUST00000188633 1227 ntAPPRIS P1 TSL 3 BASIC15.98■□□□□ 0.15
Scube3Q66PY1 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Scube3Q66PY1 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC15.98■□□□□ 0.15
Scube3Q66PY1 Gm43332-201ENSMUST00000202511 1044 ntBASIC15.98■□□□□ 0.15
Scube3Q66PY1 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Scube3Q66PY1 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Scube3Q66PY1 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC15.98■□□□□ 0.15
Scube3Q66PY1 AC130669.1-201ENSMUST00000228537 1672 ntBASIC15.98■□□□□ 0.15
Scube3Q66PY1 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Scube3Q66PY1 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC15.98■□□□□ 0.15
Scube3Q66PY1 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC15.98■□□□□ 0.15
Scube3Q66PY1 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Scube3Q66PY1 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Scube3Q66PY1 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Scube3Q66PY1 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Scube3Q66PY1 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Scube3Q66PY1 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC15.97■□□□□ 0.15
Scube3Q66PY1 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Scube3Q66PY1 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Scube3Q66PY1 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC15.97■□□□□ 0.15
Scube3Q66PY1 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Scube3Q66PY1 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Scube3Q66PY1 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Scube3Q66PY1 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Scube3Q66PY1 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Scube3Q66PY1 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
Scube3Q66PY1 Gm15467-201ENSMUST00000120582 445 ntBASIC15.97■□□□□ 0.15
Scube3Q66PY1 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Scube3Q66PY1 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Scube3Q66PY1 Gm5264-201ENSMUST00000190584 848 ntBASIC15.97■□□□□ 0.15
Scube3Q66PY1 Klk1b7-ps-201ENSMUST00000078897 448 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Scube3Q66PY1 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms