Protein–RNA interactions for Protein: Q63870

Col7a1, Collagen alpha-1(VII) chain, mousemouse

Predictions only

Length 2,944 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col7a1Q63870 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Col7a1Q63870 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC12.42□□□□□ -0.42
Col7a1Q63870 Gm27501-201ENSMUST00000183599 107 ntBASIC12.42□□□□□ -0.42
Col7a1Q63870 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC12.42□□□□□ -0.42
Col7a1Q63870 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col7a1Q63870 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC12.42□□□□□ -0.42
Col7a1Q63870 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col7a1Q63870 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Col7a1Q63870 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col7a1Q63870 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col7a1Q63870 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col7a1Q63870 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col7a1Q63870 Gm12134-201ENSMUST00000122109 520 ntBASIC12.42□□□□□ -0.42
Col7a1Q63870 Gm27847-201ENSMUST00000183711 107 ntBASIC12.42□□□□□ -0.42
Col7a1Q63870 Gm27375-201ENSMUST00000183799 107 ntBASIC12.42□□□□□ -0.42
Col7a1Q63870 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col7a1Q63870 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col7a1Q63870 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Col7a1Q63870 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Col7a1Q63870 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
Col7a1Q63870 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col7a1Q63870 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC12.42□□□□□ -0.42
Col7a1Q63870 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col7a1Q63870 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col7a1Q63870 Gm14722-201ENSMUST00000118943 689 ntBASIC12.41□□□□□ -0.42
Col7a1Q63870 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Col7a1Q63870 Gm29649-201ENSMUST00000185649 419 ntBASIC12.41□□□□□ -0.42
Col7a1Q63870 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC12.41□□□□□ -0.42
Col7a1Q63870 AC160980.1-201ENSMUST00000224136 970 ntBASIC12.41□□□□□ -0.42
Col7a1Q63870 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col7a1Q63870 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Col7a1Q63870 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Col7a1Q63870 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC12.41□□□□□ -0.42
Col7a1Q63870 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col7a1Q63870 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC12.41□□□□□ -0.42
Col7a1Q63870 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col7a1Q63870 Gm11841-201ENSMUST00000117060 1963 ntBASIC12.41□□□□□ -0.42
Col7a1Q63870 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC12.41□□□□□ -0.42
Col7a1Q63870 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC12.41□□□□□ -0.42
Col7a1Q63870 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC12.41□□□□□ -0.42
Col7a1Q63870 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC12.41□□□□□ -0.42
Col7a1Q63870 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC12.41□□□□□ -0.42
Col7a1Q63870 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC12.41□□□□□ -0.42
Col7a1Q63870 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC12.41□□□□□ -0.42
Col7a1Q63870 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col7a1Q63870 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col7a1Q63870 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Col7a1Q63870 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col7a1Q63870 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col7a1Q63870 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Col7a1Q63870 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col7a1Q63870 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
Col7a1Q63870 Gm7783-201ENSMUST00000204795 781 ntBASIC12.41□□□□□ -0.42
Col7a1Q63870 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC12.41□□□□□ -0.42
Col7a1Q63870 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col7a1Q63870 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col7a1Q63870 Gm5161-201ENSMUST00000075243 853 ntBASIC12.41□□□□□ -0.42
Col7a1Q63870 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col7a1Q63870 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Col7a1Q63870 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC12.4□□□□□ -0.42
Col7a1Q63870 Gm12585-201ENSMUST00000117307 290 ntBASIC12.4□□□□□ -0.42
Col7a1Q63870 Gm27341-201ENSMUST00000183570 106 ntBASIC12.4□□□□□ -0.42
Col7a1Q63870 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC12.4□□□□□ -0.42
Col7a1Q63870 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Col7a1Q63870 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC12.4□□□□□ -0.42
Col7a1Q63870 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col7a1Q63870 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col7a1Q63870 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col7a1Q63870 Gm13337-201ENSMUST00000119183 1594 ntBASIC12.4□□□□□ -0.42
Col7a1Q63870 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Col7a1Q63870 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col7a1Q63870 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Col7a1Q63870 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Col7a1Q63870 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC12.4□□□□□ -0.42
Col7a1Q63870 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Col7a1Q63870 Gm8775-201ENSMUST00000170943 1327 ntBASIC12.39□□□□□ -0.43
Col7a1Q63870 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
Col7a1Q63870 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Col7a1Q63870 Mir877-201ENSMUST00000104738 85 ntBASIC12.39□□□□□ -0.43
Col7a1Q63870 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Col7a1Q63870 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Col7a1Q63870 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col7a1Q63870 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Col7a1Q63870 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col7a1Q63870 Rbfox2-206ENSMUST00000227314 1810 ntBASIC12.39□□□□□ -0.43
Col7a1Q63870 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col7a1Q63870 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Col7a1Q63870 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
Col7a1Q63870 Gm43822-201ENSMUST00000200285 476 ntBASIC12.39□□□□□ -0.43
Col7a1Q63870 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC12.39□□□□□ -0.43
Col7a1Q63870 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col7a1Q63870 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col7a1Q63870 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col7a1Q63870 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Col7a1Q63870 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col7a1Q63870 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col7a1Q63870 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col7a1Q63870 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col7a1Q63870 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col7a1Q63870 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms