Protein–RNA interactions for Protein: Q62232

Six2, Homeobox protein SIX2, mousemouse

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six2Q62232 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC16.23■□□□□ 0.19
Six2Q62232 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Six2Q62232 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Six2Q62232 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Six2Q62232 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Six2Q62232 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Six2Q62232 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Six2Q62232 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC16.23■□□□□ 0.19
Six2Q62232 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Six2Q62232 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Six2Q62232 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC16.23■□□□□ 0.19
Six2Q62232 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Six2Q62232 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC16.23■□□□□ 0.19
Six2Q62232 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Six2Q62232 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Six2Q62232 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Six2Q62232 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Six2Q62232 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Six2Q62232 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Six2Q62232 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Six2Q62232 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Six2Q62232 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Six2Q62232 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Six2Q62232 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Six2Q62232 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Six2Q62232 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Six2Q62232 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC16.22■□□□□ 0.19
Six2Q62232 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Six2Q62232 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Six2Q62232 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Six2Q62232 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Six2Q62232 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Six2Q62232 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Six2Q62232 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Six2Q62232 Gm13884-201ENSMUST00000118103 829 ntBASIC16.22■□□□□ 0.19
Six2Q62232 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Six2Q62232 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC16.22■□□□□ 0.19
Six2Q62232 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Six2Q62232 Gm5864-201ENSMUST00000202263 970 ntBASIC16.22■□□□□ 0.19
Six2Q62232 Gm45167-201ENSMUST00000208007 322 ntBASIC16.22■□□□□ 0.19
Six2Q62232 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Six2Q62232 AC161829.1-201ENSMUST00000220298 281 ntBASIC16.22■□□□□ 0.19
Six2Q62232 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Six2Q62232 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Six2Q62232 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Six2Q62232 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Six2Q62232 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Six2Q62232 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Six2Q62232 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Six2Q62232 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Six2Q62232 Gm37736-201ENSMUST00000193564 2802 ntBASIC16.22■□□□□ 0.19
Six2Q62232 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Six2Q62232 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Six2Q62232 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Six2Q62232 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Six2Q62232 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Six2Q62232 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Six2Q62232 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Six2Q62232 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Six2Q62232 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
Six2Q62232 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Six2Q62232 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Six2Q62232 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Six2Q62232 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Six2Q62232 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Six2Q62232 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Six2Q62232 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Six2Q62232 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Six2Q62232 Gm4899-201ENSMUST00000178708 719 ntBASIC16.21■□□□□ 0.19
Six2Q62232 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Six2Q62232 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Six2Q62232 Best4-ps-201ENSMUST00000129783 1380 ntBASIC16.21■□□□□ 0.19
Six2Q62232 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Six2Q62232 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Six2Q62232 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Six2Q62232 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
Six2Q62232 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
Six2Q62232 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Six2Q62232 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Six2Q62232 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Six2Q62232 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Six2Q62232 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC16.2■□□□□ 0.18
Six2Q62232 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Six2Q62232 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Six2Q62232 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Six2Q62232 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Six2Q62232 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Six2Q62232 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Six2Q62232 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Six2Q62232 Gm45133-201ENSMUST00000207548 2773 ntBASIC16.2■□□□□ 0.18
Six2Q62232 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Six2Q62232 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC16.2■□□□□ 0.18
Six2Q62232 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC16.2■□□□□ 0.18
Six2Q62232 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Six2Q62232 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Six2Q62232 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC16.2■□□□□ 0.18
Six2Q62232 Gm10060-201ENSMUST00000212002 111 ntBASIC16.2■□□□□ 0.18
Six2Q62232 AC164567.1-201ENSMUST00000219185 960 ntBASIC16.2■□□□□ 0.18
Six2Q62232 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Six2Q62232 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 84.6 ms