Protein–RNA interactions for Protein: Q62158

Trim27, Zinc finger protein RFP, mousemouse

Predictions only

Length 513 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim27Q62158 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
Trim27Q62158 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim27Q62158 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim27Q62158 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim27Q62158 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Trim27Q62158 Gm29340-201ENSMUST00000188763 3854 ntBASIC18.71■□□□□ 0.59
Trim27Q62158 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Trim27Q62158 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Trim27Q62158 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim27Q62158 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim27Q62158 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim27Q62158 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Trim27Q62158 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim27Q62158 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Trim27Q62158 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC18.7■□□□□ 0.58
Trim27Q62158 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim27Q62158 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC18.7■□□□□ 0.58
Trim27Q62158 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC18.7■□□□□ 0.58
Trim27Q62158 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Trim27Q62158 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Trim27Q62158 Gm43598-201ENSMUST00000202482 2479 ntBASIC18.7■□□□□ 0.58
Trim27Q62158 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim27Q62158 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC18.7■□□□□ 0.58
Trim27Q62158 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC18.7■□□□□ 0.58
Trim27Q62158 Gm7787-201ENSMUST00000216858 688 ntBASIC18.7■□□□□ 0.58
Trim27Q62158 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim27Q62158 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim27Q62158 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Trim27Q62158 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim27Q62158 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim27Q62158 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim27Q62158 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Trim27Q62158 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim27Q62158 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim27Q62158 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim27Q62158 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim27Q62158 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim27Q62158 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim27Q62158 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim27Q62158 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim27Q62158 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim27Q62158 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim27Q62158 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC18.69■□□□□ 0.58
Trim27Q62158 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim27Q62158 Gm7461-201ENSMUST00000058918 827 ntBASIC18.69■□□□□ 0.58
Trim27Q62158 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim27Q62158 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Trim27Q62158 Gm43195-201ENSMUST00000200614 2332 ntBASIC18.69■□□□□ 0.58
Trim27Q62158 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Trim27Q62158 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC18.69■□□□□ 0.58
Trim27Q62158 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC18.69■□□□□ 0.58
Trim27Q62158 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim27Q62158 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim27Q62158 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim27Q62158 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC18.68■□□□□ 0.58
Trim27Q62158 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim27Q62158 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Trim27Q62158 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim27Q62158 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim27Q62158 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim27Q62158 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim27Q62158 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim27Q62158 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim27Q62158 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim27Q62158 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC18.68■□□□□ 0.58
Trim27Q62158 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim27Q62158 Gm18195-201ENSMUST00000207604 706 ntBASIC18.68■□□□□ 0.58
Trim27Q62158 AC164567.1-201ENSMUST00000219185 960 ntBASIC18.68■□□□□ 0.58
Trim27Q62158 Gm18246-201ENSMUST00000221023 728 ntBASIC18.68■□□□□ 0.58
Trim27Q62158 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim27Q62158 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Trim27Q62158 Gm37728-201ENSMUST00000195025 2292 ntBASIC18.68■□□□□ 0.58
Trim27Q62158 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Trim27Q62158 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Trim27Q62158 Gm5357-201ENSMUST00000212720 1924 ntBASIC18.68■□□□□ 0.58
Trim27Q62158 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim27Q62158 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC18.68■□□□□ 0.58
Trim27Q62158 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim27Q62158 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim27Q62158 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Trim27Q62158 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim27Q62158 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim27Q62158 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Trim27Q62158 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim27Q62158 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Trim27Q62158 AC154527.4-201ENSMUST00000224364 1667 ntBASIC18.67■□□□□ 0.58
Trim27Q62158 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim27Q62158 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim27Q62158 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim27Q62158 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Trim27Q62158 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Trim27Q62158 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim27Q62158 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC18.67■□□□□ 0.58
Trim27Q62158 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC18.67■□□□□ 0.58
Trim27Q62158 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC18.67■□□□□ 0.58
Trim27Q62158 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC18.67■□□□□ 0.58
Trim27Q62158 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC18.67■□□□□ 0.58
Trim27Q62158 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Trim27Q62158 AC084391.1-201ENSMUST00000200651 141 ntBASIC18.67■□□□□ 0.58
Trim27Q62158 Gm42670-201ENSMUST00000201816 1292 ntBASIC18.67■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms