Protein–RNA interactions for Protein: Q61602

Gli3, Transcriptional activator GLI3, mousemouse

Predictions only

Length 1,583 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli3Q61602 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC20.29■□□□□ 0.84
Gli3Q61602 Gm24526-201ENSMUST00000082921 158 ntBASIC20.29■□□□□ 0.84
Gli3Q61602 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Gli3Q61602 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Gli3Q61602 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Gli3Q61602 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Gli3Q61602 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Gli3Q61602 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Gli3Q61602 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Gli3Q61602 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Gli3Q61602 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC20.28■□□□□ 0.84
Gli3Q61602 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Gli3Q61602 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Gli3Q61602 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Gli3Q61602 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Gli3Q61602 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Gli3Q61602 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Gli3Q61602 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Gli3Q61602 Gm18307-201ENSMUST00000206864 949 ntBASIC20.28■□□□□ 0.84
Gli3Q61602 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Gli3Q61602 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Gli3Q61602 Gm7561-201ENSMUST00000211203 886 ntBASIC20.28■□□□□ 0.84
Gli3Q61602 CU024892.2-201ENSMUST00000224608 832 ntBASIC20.28■□□□□ 0.84
Gli3Q61602 AC126253.1-201ENSMUST00000227974 824 ntBASIC20.28■□□□□ 0.84
Gli3Q61602 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Gli3Q61602 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Gli3Q61602 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Gli3Q61602 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Gli3Q61602 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Gli3Q61602 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Gli3Q61602 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Gli3Q61602 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Gli3Q61602 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC20.27■□□□□ 0.84
Gli3Q61602 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Gli3Q61602 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Gli3Q61602 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC20.27■□□□□ 0.84
Gli3Q61602 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC20.27■□□□□ 0.84
Gli3Q61602 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Gli3Q61602 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Gli3Q61602 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC20.27■□□□□ 0.83
Gli3Q61602 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Gli3Q61602 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Gli3Q61602 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Gli3Q61602 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Gli3Q61602 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Gli3Q61602 Gm8801-201ENSMUST00000173255 1064 ntBASIC20.26■□□□□ 0.83
Gli3Q61602 Gm8652-201ENSMUST00000181363 964 ntBASIC20.26■□□□□ 0.83
Gli3Q61602 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Gli3Q61602 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC20.26■□□□□ 0.83
Gli3Q61602 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Gli3Q61602 Gm6091-201ENSMUST00000098307 165 ntBASIC20.26■□□□□ 0.83
Gli3Q61602 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Gli3Q61602 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Gli3Q61602 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Gli3Q61602 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Gli3Q61602 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Gli3Q61602 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Gli3Q61602 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Gli3Q61602 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Gli3Q61602 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Gli3Q61602 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC20.26■□□□□ 0.83
Gli3Q61602 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Gli3Q61602 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Gli3Q61602 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Gli3Q61602 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC20.25■□□□□ 0.83
Gli3Q61602 Mettl6-204ENSMUST00000227595 1027 ntBASIC20.25■□□□□ 0.83
Gli3Q61602 AC154276.1-201ENSMUST00000228874 1299 ntBASIC20.25■□□□□ 0.83
Gli3Q61602 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Gli3Q61602 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC20.25■□□□□ 0.83
Gli3Q61602 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Gli3Q61602 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Gli3Q61602 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Gli3Q61602 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Gli3Q61602 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Gli3Q61602 Gm15635-204ENSMUST00000208024 2539 ntBASIC20.25■□□□□ 0.83
Gli3Q61602 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Gli3Q61602 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Gli3Q61602 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Gli3Q61602 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Gli3Q61602 Gm5187-201ENSMUST00000117317 991 ntBASIC20.25■□□□□ 0.83
Gli3Q61602 Gm7556-201ENSMUST00000201178 1084 ntBASIC20.25■□□□□ 0.83
Gli3Q61602 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Gli3Q61602 Gm9823-201ENSMUST00000051212 327 ntBASIC20.25■□□□□ 0.83
Gli3Q61602 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Gli3Q61602 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Gli3Q61602 Gm12585-201ENSMUST00000117307 290 ntBASIC20.24■□□□□ 0.83
Gli3Q61602 Gm11814-201ENSMUST00000119515 929 ntBASIC20.24■□□□□ 0.83
Gli3Q61602 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
Gli3Q61602 Gm37714-201ENSMUST00000194742 342 ntBASIC20.24■□□□□ 0.83
Gli3Q61602 Gm6013-201ENSMUST00000212264 699 ntBASIC20.24■□□□□ 0.83
Gli3Q61602 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC20.24■□□□□ 0.83
Gli3Q61602 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC20.24■□□□□ 0.83
Gli3Q61602 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Gli3Q61602 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC20.24■□□□□ 0.83
Gli3Q61602 Gm38327-201ENSMUST00000195852 1755 ntBASIC20.24■□□□□ 0.83
Gli3Q61602 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Gli3Q61602 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Gli3Q61602 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Gli3Q61602 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Gli3Q61602 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms