Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Ift88Q61371 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ift88Q61371 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC16.9■□□□□ 0.3
Ift88Q61371 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ift88Q61371 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Ift88Q61371 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
Ift88Q61371 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Ift88Q61371 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ift88Q61371 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ift88Q61371 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ift88Q61371 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ift88Q61371 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Ift88Q61371 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Ift88Q61371 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
Ift88Q61371 AC158538.2-201ENSMUST00000225455 906 ntBASIC16.89■□□□□ 0.29
Ift88Q61371 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ift88Q61371 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ift88Q61371 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ift88Q61371 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ift88Q61371 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Ift88Q61371 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC16.89■□□□□ 0.29
Ift88Q61371 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ift88Q61371 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Ift88Q61371 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ift88Q61371 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ift88Q61371 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ift88Q61371 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ift88Q61371 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Ift88Q61371 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ift88Q61371 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ift88Q61371 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ift88Q61371 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ift88Q61371 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ift88Q61371 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Ift88Q61371 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC16.88■□□□□ 0.29
Ift88Q61371 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC16.88■□□□□ 0.29
Ift88Q61371 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ift88Q61371 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ift88Q61371 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Ift88Q61371 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Ift88Q61371 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
Ift88Q61371 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ift88Q61371 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ift88Q61371 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ift88Q61371 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ift88Q61371 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
Ift88Q61371 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Ift88Q61371 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ift88Q61371 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ift88Q61371 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Ift88Q61371 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ift88Q61371 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ift88Q61371 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Ift88Q61371 Gm4459-201ENSMUST00000118750 468 ntBASIC16.87■□□□□ 0.29
Ift88Q61371 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Ift88Q61371 Gm12497-201ENSMUST00000138778 237 ntBASIC16.87■□□□□ 0.29
Ift88Q61371 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC16.87■□□□□ 0.29
Ift88Q61371 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC16.87■□□□□ 0.29
Ift88Q61371 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC16.87■□□□□ 0.29
Ift88Q61371 Gm27867-201ENSMUST00000184778 125 ntBASIC16.87■□□□□ 0.29
Ift88Q61371 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC16.87■□□□□ 0.29
Ift88Q61371 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ift88Q61371 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ift88Q61371 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Ift88Q61371 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC16.87■□□□□ 0.29
Ift88Q61371 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ift88Q61371 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC16.87■□□□□ 0.29
Ift88Q61371 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ift88Q61371 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ift88Q61371 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ift88Q61371 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ift88Q61371 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ift88Q61371 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ift88Q61371 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ift88Q61371 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ift88Q61371 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ift88Q61371 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC16.86■□□□□ 0.29
Ift88Q61371 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ift88Q61371 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ift88Q61371 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ift88Q61371 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ift88Q61371 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Ift88Q61371 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ift88Q61371 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ift88Q61371 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ift88Q61371 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Ift88Q61371 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC16.86■□□□□ 0.29
Ift88Q61371 Gm14780-201ENSMUST00000118387 2737 ntBASIC16.86■□□□□ 0.29
Ift88Q61371 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC16.86■□□□□ 0.29
Ift88Q61371 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ift88Q61371 Gm10676-201ENSMUST00000098778 3221 ntBASIC16.86■□□□□ 0.29
Ift88Q61371 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ift88Q61371 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Ift88Q61371 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ift88Q61371 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ift88Q61371 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC16.86■□□□□ 0.29
Ift88Q61371 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Ift88Q61371 Gm7506-201ENSMUST00000207758 815 ntBASIC16.86■□□□□ 0.29
Ift88Q61371 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Ift88Q61371 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms