Protein–RNA interactions for Protein: Q61245

Col11a1, Collagen alpha-1(XI) chain, mousemouse

Predictions only

Length 1,804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a1Q61245 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC16.83■□□□□ 0.28
Col11a1Q61245 AC238811.3-201ENSMUST00000225422 709 ntBASIC16.83■□□□□ 0.28
Col11a1Q61245 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Col11a1Q61245 Gm9396-201ENSMUST00000076703 567 ntBASIC16.83■□□□□ 0.28
Col11a1Q61245 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Col11a1Q61245 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Col11a1Q61245 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Col11a1Q61245 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Col11a1Q61245 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Col11a1Q61245 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Col11a1Q61245 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Col11a1Q61245 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Col11a1Q61245 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Col11a1Q61245 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col11a1Q61245 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC16.82■□□□□ 0.28
Col11a1Q61245 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC16.82■□□□□ 0.28
Col11a1Q61245 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
Col11a1Q61245 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col11a1Q61245 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC16.82■□□□□ 0.28
Col11a1Q61245 Gm38319-201ENSMUST00000194537 1266 ntBASIC16.82■□□□□ 0.28
Col11a1Q61245 AC155729.1-201ENSMUST00000227758 544 ntBASIC16.82■□□□□ 0.28
Col11a1Q61245 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC16.82■□□□□ 0.28
Col11a1Q61245 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Col11a1Q61245 Tcf21-202ENSMUST00000218002 1788 ntBASIC16.82■□□□□ 0.28
Col11a1Q61245 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC16.82■□□□□ 0.28
Col11a1Q61245 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col11a1Q61245 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col11a1Q61245 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col11a1Q61245 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col11a1Q61245 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col11a1Q61245 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col11a1Q61245 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col11a1Q61245 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Col11a1Q61245 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col11a1Q61245 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Col11a1Q61245 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC16.82■□□□□ 0.28
Col11a1Q61245 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC16.82■□□□□ 0.28
Col11a1Q61245 Gm27701-201ENSMUST00000184498 110 ntBASIC16.82■□□□□ 0.28
Col11a1Q61245 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col11a1Q61245 Gm5035-201ENSMUST00000215581 927 ntBASIC16.82■□□□□ 0.28
Col11a1Q61245 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col11a1Q61245 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Col11a1Q61245 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Col11a1Q61245 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col11a1Q61245 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Col11a1Q61245 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Col11a1Q61245 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Col11a1Q61245 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Col11a1Q61245 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Col11a1Q61245 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Col11a1Q61245 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC16.81■□□□□ 0.28
Col11a1Q61245 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Col11a1Q61245 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Col11a1Q61245 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC16.81■□□□□ 0.28
Col11a1Q61245 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Col11a1Q61245 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC16.81■□□□□ 0.28
Col11a1Q61245 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC16.81■□□□□ 0.28
Col11a1Q61245 AC155286.1-201ENSMUST00000218632 448 ntBASIC16.81■□□□□ 0.28
Col11a1Q61245 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Col11a1Q61245 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Col11a1Q61245 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
Col11a1Q61245 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
Col11a1Q61245 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Col11a1Q61245 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Col11a1Q61245 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Col11a1Q61245 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Col11a1Q61245 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Col11a1Q61245 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Col11a1Q61245 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Col11a1Q61245 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Col11a1Q61245 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Col11a1Q61245 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Col11a1Q61245 Gm4984-201ENSMUST00000115987 360 ntBASIC16.8■□□□□ 0.28
Col11a1Q61245 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
Col11a1Q61245 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC16.8■□□□□ 0.28
Col11a1Q61245 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Col11a1Q61245 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC16.8■□□□□ 0.28
Col11a1Q61245 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Col11a1Q61245 Gm5356-201ENSMUST00000093326 615 ntBASIC16.8■□□□□ 0.28
Col11a1Q61245 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Col11a1Q61245 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Col11a1Q61245 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Col11a1Q61245 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Col11a1Q61245 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Col11a1Q61245 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Col11a1Q61245 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC16.8■□□□□ 0.28
Col11a1Q61245 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Col11a1Q61245 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Col11a1Q61245 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC16.8■□□□□ 0.28
Col11a1Q61245 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC16.8■□□□□ 0.28
Col11a1Q61245 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC16.8■□□□□ 0.28
Col11a1Q61245 Ldha-ps-201ENSMUST00000119390 995 ntBASIC16.8■□□□□ 0.28
Col11a1Q61245 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC16.8■□□□□ 0.28
Col11a1Q61245 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Col11a1Q61245 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Col11a1Q61245 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Col11a1Q61245 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Col11a1Q61245 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Col11a1Q61245 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Col11a1Q61245 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms